Gene EcolC_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0901 
Symbol 
ID6068698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp975720 
End bp976163 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content55% 
IMG OID641600307 
Productcysteine desulfurase, sulfur acceptor subunit CsdE 
Protein accessionYP_001723897 
Protein GI170018943 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID[TIGR03391] cysteine desulfurase, sulfur acceptor subunit CsdE 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACC CGCAATTCGC CGGACATCCG TTCGGCACAA CCGTAACCGC AGAAACGTTA 
CGCAATACCT TCGCACCGTT GACGCAATGG GAAGATAAAT ATCGCCAGTT GATCATGCTG
GGGAAACAGC TTCCGGCATT GCCAGACGAG TTAAAAGCGC AGGCTAAAGA GATTGCCGGA
TGCGAAAACC GCGTCTGGCT GGGATATACA GTGGCTGAAA ACGGCAAAAT GCATTTCTTT
GGCGACAGCG AAGGGCGCAT TGTGCGCGGC CTGCTGGCGG TGTTGTTGAC TGCCGTTGAG
GGGAAAACCG CCGCCGAGTT GCAGGCACAG TCACCACTGG CATTGTTTGA TGAGCTGGGA
TTACGTGCGC AGCTTAGCGC CTCACGCAGC CAGGGGTTAA ATGCGTTAAG CGAGGCGATT
ATCGCTGCGA CGAAGCAGGT TTAA
 
Protein sequence
MTNPQFAGHP FGTTVTAETL RNTFAPLTQW EDKYRQLIML GKQLPALPDE LKAQAKEIAG 
CENRVWLGYT VAENGKMHFF GDSEGRIVRG LLAVLLTAVE GKTAAELQAQ SPLALFDELG
LRAQLSASRS QGLNALSEAI IAATKQV