Gene EcolC_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0889 
Symbol 
ID6064641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp956528 
End bp956998 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content54% 
IMG OID641600292 
Producthypothetical protein 
Protein accessionYP_001723885 
Protein GI170018931 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC AACGTGGTTA TACGCTGATT GAAACGCTGG TCGCGATGCT GATTTTGGTC 
ATGCTAAGCG CAAGTGGACT CTATGGCTGG CAATACTGGC AGCAGTCGCA ACGGCTATGG
CAAACCGCCA GCCAGGCGCG GGACTATTTG CTCTATTTAC GTGAAGATGC CAACTGGCAT
AACCGCGACC ACAGTATCAG CGTTATCAGG GAGGGGACGT TATGGTGCCT TGTGAGTTCC
GCTGCTGGGG CCAATACCTG TCATGGCAGT TCACCATTGG TCTTTGTGCC ACGCTGGCCC
GAAGTCGAAA TGAGCGACCT GACACCTTCG CTTGCTTTCT TTGGCCTGCG CAATACCGCA
TGGGCCGGGC ATATTCGCTT CAAAAACTCA ACGGGCGAGT GGTGGCTGGT GGTTTCGCCG
TGGGGAAGAC TCCGGCTTTG TCAGCAAGGA GAAACAGAAG GATGCCTGTA A
 
Protein sequence
MKTQRGYTLI ETLVAMLILV MLSASGLYGW QYWQQSQRLW QTASQARDYL LYLREDANWH 
NRDHSISVIR EGTLWCLVSS AAGANTCHGS SPLVFVPRWP EVEMSDLTPS LAFFGLRNTA
WAGHIRFKNS TGEWWLVVSP WGRLRLCQQG ETEGCL