Gene EcolC_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0888 
SymbolthyA 
ID6064653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp955549 
End bp956343 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content51% 
IMG OID641600291 
Productthymidylate synthase 
Protein accessionYP_001723884 
Protein GI170018930 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03284] thymidylate synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGT ATTTAGAACT GATGCAAAAA GTGCTCGACG AAGGCACACA GAAAAACGAC 
CGTACCGGAA CCGGAACGCT TTCTATTTTT GGTCATCAGA TGCGTTTTAA CCTGCAGGAT
GGATTCCCGC TGGTGACAAC CAAACGTTGC CACCTGCGTT CCATCATCCA CGAACTGCTG
TGGTTCCTGC AGGGCAATAC TAACATTGCT TATCTACACG AAAACAATGT CACCATCTGG
GACGAATGGG CCGATGAAAA TGGCGACCTC GGGCCAGTGT ATGGTAAACA GTGGCGCGCC
TGGCCAACGC CAGATGGTCG TCATATTGAC CAGATTACTA CGGTACTGAA CCAGCTGAAA
AACGACCCGG ATTCGCGCCG CATTATTGTT TCAGCGTGGA ACGTAGGCGA ACTGGATAAA
ATGGCGCTGG CACCGTGCCA TGCATTCTTC CAGTTCTATG TGGCAGACGG CAAACTCTCT
TGCCAGCTTT ATCAGCGCTC CTGTGACGTC TTCCTCGGCC TGCCGTTCAA CATTGCCAGC
TACGCGTTAT TGGTGCATAT GATGGCGCAG CAGTGCGATC TGGAAGTGGG TGATTTTGTC
TGGACCGGTG GCGACACGCA TCTGTACAGC AACCATATGG ATCAAACTCA TCTGCAATTA
AGCCGCGAAC CGCGTCCGCT GCCGAAGTTG ATTATCAAAC GTAAACCCGA ATCCATCTTC
GACTACCGTT TCGAAGACTT TGAGATTGAA GGCTACGATC CGCATCCGGG CATTAAAGCG
CCGGTGGCTA TCTAA
 
Protein sequence
MKQYLELMQK VLDEGTQKND RTGTGTLSIF GHQMRFNLQD GFPLVTTKRC HLRSIIHELL 
WFLQGNTNIA YLHENNVTIW DEWADENGDL GPVYGKQWRA WPTPDGRHID QITTVLNQLK
NDPDSRRIIV SAWNVGELDK MALAPCHAFF QFYVADGKLS CQLYQRSCDV FLGLPFNIAS
YALLVHMMAQ QCDLEVGDFV WTGGDTHLYS NHMDQTHLQL SREPRPLPKL IIKRKPESIF
DYRFEDFEIE GYDPHPGIKA PVAI