Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0884 |
Symbol | |
ID | 6064717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 950353 |
End bp | 951042 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641600287 |
Product | DNA mismatch repair protein |
Protein accession | YP_001723880 |
Protein GI | 170018926 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3066] DNA mismatch repair protein |
TIGRFAM ID | [TIGR02248] DNA mismatch repair endonuclease MutH |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000023918 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCAAC CTCGCCCACT GCTCTCTCCT CCCGAAACTG AAGAACAGTT GTTAGCGCAA GCACAGCAAC TTTCTGGTTA TACATTGGGA GAACTGGCGG CACTTGCCGG GCTGGTTACG CCAGAGAATT TAAAACGCGA TAAAGGCTGG ATTGGCGTGT TACTGGAGAT CTGGCTAGGT GCCAGCGCAG GGAGTAAACC TGAGCAAGAT TTTGCTGCTC TGGGCGTGGA ACTTAAAACT ATCCCTGTGG ATAGTCTTGG TCGTCCGCTG GAAACAACAT TCGTTTGTGT TGCCCCGTTA ACGGGCAATA GCGGGGTGAC CTGGGAAACC AGCCACGTGC GCCACAAACT CAAACGCGTA CTGTGGATAC CGGTTGAAGG CGAGCGCAGC ATCCCGCTGG CGCAGCGTCG CGTTGGATCA CCGTTGCTGT GGAGCCCGAA TGAAGAGGAA GACCGACAGC TACGCGAAGA CTGGGAAGAA TTAATGGATA TGATTGTTCT CGGTCAGGTT GAGCGGATTA CCGCTCGTCA CGGGGAATAT TTACAGATAC GACCGAAAGC AGCGAATGCG AAAGCGCTTA CCGAAGCCAT TGGTGCCCGG GGCGAACGGA TTCTGACGCT GCCACGCGGC TTTTATTTGA AGAAGAATTT CACCAGTGCG CTACTGGCCC GTCATTTTCT GATCCAGTAG
|
Protein sequence | MSQPRPLLSP PETEEQLLAQ AQQLSGYTLG ELAALAGLVT PENLKRDKGW IGVLLEIWLG ASAGSKPEQD FAALGVELKT IPVDSLGRPL ETTFVCVAPL TGNSGVTWET SHVRHKLKRV LWIPVEGERS IPLAQRRVGS PLLWSPNEEE DRQLREDWEE LMDMIVLGQV ERITARHGEY LQIRPKAANA KALTEAIGAR GERILTLPRG FYLKKNFTSA LLARHFLIQ
|
| |