Gene EcolC_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0872 
Symbol 
ID6064854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp936579 
End bp937415 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content50% 
IMG OID641600275 
Product5-keto-4-deoxyuronate isomerase 
Protein accessionYP_001723868 
Protein GI170018914 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3717] 5-keto 4-deoxyuronate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGTAA GACAGAGCAT CCACAGTGCG CACGCAAAAA CGCTGGATAC CCAAGGGCTG 
CGCAATGAAT TTTTGGTTGA AAAGGTATTT GTCGCCGATG AGTACACCAT GGTTTACAGC
CACATTGACC GAATTATTGT TGGCGGCATT ATGCCGATAA CTAAAACGGT TTCCGTTGGC
GGGGAAGTTG GTAAACAACT CGGCGTAAGC TATTTCCTTG AACGTCGCGA GTTAGGTGTT
ATCAATATTG GCGGTGCCGG TACGATTACT GTCGATGGCC AATGCTATGA AATCGGTCAC
CGCGACGCCC TGTATGTTGG TAAAGGTGCA AAAGAAGTTG TCTTTGCCAG TATTGATACC
GGCACTCCGG CGAAGTTTTA TTACAATTGC GCACCCGCGC ATACGACGTA TCCCACCAAA
AAAGTCACCC CGGACGAAGT ATCTCCAGTC ACGTTAGGCG ATAACCTCAC CAGTAACCGT
CGCACTATTA ACAAATATTT TGTCCCGGAT GTGCTGGAAA CCTGCCAATT GAGTATGGGG
CTGACGGAGC TGGCTCCAGG TAACTTGTGG AACACCATGC CGTGTCACAC CCACGAGCGC
CGGATGGAAG TTTATTTCTA TTTCAATATG GATGATGACG CCTGCGTTTT CCACATGATG
GGGCAACCGC AAGAAACGCG TCACATTGTG ATGCATAACG AGCAGGCGGT GATCTCCCCG
AGCTGGTCGA TCCATTCCGG CGTCGGAACC AAAGCTTATA CCTTTATCTG GGGCATGGTT
GGTGAAAACC AGGTCTTTGA TGATATGGAC CATGTGGCCG TTAAAGATTT GCGCTAG
 
Protein sequence
MDVRQSIHSA HAKTLDTQGL RNEFLVEKVF VADEYTMVYS HIDRIIVGGI MPITKTVSVG 
GEVGKQLGVS YFLERRELGV INIGGAGTIT VDGQCYEIGH RDALYVGKGA KEVVFASIDT
GTPAKFYYNC APAHTTYPTK KVTPDEVSPV TLGDNLTSNR RTINKYFVPD VLETCQLSMG
LTELAPGNLW NTMPCHTHER RMEVYFYFNM DDDACVFHMM GQPQETRHIV MHNEQAVISP
SWSIHSGVGT KAYTFIWGMV GENQVFDDMD HVAVKDLR