Gene EcolC_0868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0868 
Symbol 
ID6064942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp931392 
End bp932201 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content40% 
IMG OID641600271 
Producttranscriptional regulator, CadC 
Protein accessionYP_001723864 
Protein GI170018910 
COG category[K] Transcription 
COG ID[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTGGA TTATTAACGA TAATATCGAG TTCTGGCCTG AGCACCGAAA ATTAATATCG 
GTACATAACG CCGATCTTAA CGTCGTTCTG ACAACGCCAG CCAGTCGATG TTTATCACTT
CTACTTGAAG CTTTTCCTGA TGTGGTTGCA CAACAAGATT TTTTCACCAG AGTCTGGGAA
GAAGAAGGTA TGCGTGTGCC TACTAACACG TTATATCAGA ACATATCCAT TATCAGACGC
GGATTTCGCG CTGTTGGTGA TACTACCCAC TCGCTAATTG CAACCGTGCC GAGAAGAGGA
TTCAAGATCC ATAATGACAT TAACATACAA AATCATGTAA TAAACTCGTC AACAGACGCA
CATACACACA ATGCCCCACC TGCCATAAAA GTTAATGCGG GATACAAAGA GAGCATTGGT
GGCGCAAAGA ATTTCAATAA CAAAATCCTC AAACATATAA AAAGTCATCT AATTATGTTG
AGCGCATTTG TCATAGGCGC ATATTCTGCA TATTGGCTAT GGAATAATAA TCAACCGAAG
CCATTTTTCA AGGATTACAA GATTGTTGCG GAAATTAATG GCTGCCATTT TAATGTAACA
GAAGATACAA TTGATGGGTT GAAAGAGTTC GATAAATATA AAACACGGAT ACTGGATTCG
GGGATTAACT GTAAAAAACA TCCGTGGTTA TACTTCCCTC TTGCAAAATC CTCACCGGGG
ATGATTGTTA TGGCATGCAA TAAAAACTAT AACCAACATG AAGTGGCAGA CTGTTTAACC
CTGTCTTACC GTGAGGTTAA TCGTGATTGA
 
Protein sequence
MYWIINDNIE FWPEHRKLIS VHNADLNVVL TTPASRCLSL LLEAFPDVVA QQDFFTRVWE 
EEGMRVPTNT LYQNISIIRR GFRAVGDTTH SLIATVPRRG FKIHNDINIQ NHVINSSTDA
HTHNAPPAIK VNAGYKESIG GAKNFNNKIL KHIKSHLIML SAFVIGAYSA YWLWNNNQPK
PFFKDYKIVA EINGCHFNVT EDTIDGLKEF DKYKTRILDS GINCKKHPWL YFPLAKSSPG
MIVMACNKNY NQHEVADCLT LSYREVNRD