Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0868 |
Symbol | |
ID | 6064942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 931392 |
End bp | 932201 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641600271 |
Product | transcriptional regulator, CadC |
Protein accession | YP_001723864 |
Protein GI | 170018910 |
COG category | [K] Transcription |
COG ID | [COG3710] DNA-binding winged-HTH domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACTGGA TTATTAACGA TAATATCGAG TTCTGGCCTG AGCACCGAAA ATTAATATCG GTACATAACG CCGATCTTAA CGTCGTTCTG ACAACGCCAG CCAGTCGATG TTTATCACTT CTACTTGAAG CTTTTCCTGA TGTGGTTGCA CAACAAGATT TTTTCACCAG AGTCTGGGAA GAAGAAGGTA TGCGTGTGCC TACTAACACG TTATATCAGA ACATATCCAT TATCAGACGC GGATTTCGCG CTGTTGGTGA TACTACCCAC TCGCTAATTG CAACCGTGCC GAGAAGAGGA TTCAAGATCC ATAATGACAT TAACATACAA AATCATGTAA TAAACTCGTC AACAGACGCA CATACACACA ATGCCCCACC TGCCATAAAA GTTAATGCGG GATACAAAGA GAGCATTGGT GGCGCAAAGA ATTTCAATAA CAAAATCCTC AAACATATAA AAAGTCATCT AATTATGTTG AGCGCATTTG TCATAGGCGC ATATTCTGCA TATTGGCTAT GGAATAATAA TCAACCGAAG CCATTTTTCA AGGATTACAA GATTGTTGCG GAAATTAATG GCTGCCATTT TAATGTAACA GAAGATACAA TTGATGGGTT GAAAGAGTTC GATAAATATA AAACACGGAT ACTGGATTCG GGGATTAACT GTAAAAAACA TCCGTGGTTA TACTTCCCTC TTGCAAAATC CTCACCGGGG ATGATTGTTA TGGCATGCAA TAAAAACTAT AACCAACATG AAGTGGCAGA CTGTTTAACC CTGTCTTACC GTGAGGTTAA TCGTGATTGA
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Protein sequence | MYWIINDNIE FWPEHRKLIS VHNADLNVVL TTPASRCLSL LLEAFPDVVA QQDFFTRVWE EEGMRVPTNT LYQNISIIRR GFRAVGDTTH SLIATVPRRG FKIHNDINIQ NHVINSSTDA HTHNAPPAIK VNAGYKESIG GAKNFNNKIL KHIKSHLIML SAFVIGAYSA YWLWNNNQPK PFFKDYKIVA EINGCHFNVT EDTIDGLKEF DKYKTRILDS GINCKKHPWL YFPLAKSSPG MIVMACNKNY NQHEVADCLT LSYREVNRD
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