| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0847 |
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| Symbol | |
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| ID | 6067332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 917351 |
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| End bp | 917611 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641600253 |
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| Product | HrpO family type III secretion protein |
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| Protein accession | YP_001723846 |
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| Protein GI | 170018892 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4794] Type III secretory pathway, component EscS |
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| TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.693953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGATA TTGTTTTTGC GGGGAATAGG GCGCTGTATC TGATTTTAGT TATGTCTGCA
GGACCTATTG CAGTTGCGAC ATTTGTTGGT TTATTGGTAG GGCTTTTTCA AACGGTAACA
CAGTTACAAG AACAGACGTT GCCATTTGGC GTCAAATTAT TATGCGTAAG TATTTGCTTT
TTTTTAATGA GCGGATGGTA TGGTGAAAAA TTATATTCGT TTGGTATCGA AATGCTGAAT
TTAGCATTCG CGAGAGGATA G
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| Protein sequence | MDDIVFAGNR ALYLILVMSA GPIAVATFVG LLVGLFQTVT QLQEQTLPFG VKLLCVSICF
FLMSGWYGEK LYSFGIEMLN LAFARG
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