Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0822 |
Symbol | |
ID | 6065417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 881812 |
End bp | 883731 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641600227 |
Product | putative oxidoreductase Fe-S binding subunit |
Protein accession | YP_001723821 |
Protein GI | 170018867 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases [COG1142] Fe-S-cluster-containing hydrogenase components 2 |
TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGT TTATCGCTGC TGAAGCTGCG GAATGTATAG GCTGTCATGC TTGTGAAATT GCCTGTGCGG TGGCACACAA TCAAGAAAAC TGGCCGCTGA GTCACAGTGA CTTTCGACCG CGTATCCACG TTGTAGGGAA AGGCCAGGCT GCGAATCCGG TGGCCTGCCA TCACTGCAAC AATGCCCCTT GCGTTACGGC TTGTCCGGTT AATGCTCTGA CTTTCCAGTC CGATAGCGTA CAACTGGACG AGCAAAAATG TATTGGTTGT AAAAGATGCG CAATCGCTTG CCCCTTTGGC GTCGTTGAGA TGGTCGATAC GATTGCGCAG AAATGCGACC TTTGTAACCA GCGCAGTTCC GGCACGCAAG CCTGTATTGA AGTTTGCCCA ACACAGGCGT TACGACTGAT GGACGATAAA GGGTTACAGC AGATAAAGGT GGCCCGCCAG CGCAAAACGG CAGCAGGAAA TGCGTCATCA GACGCTCAGC CATCTCGCAG TGCAGCGTTG CTCCCCGTTA ACTCGCGTAA AGGCGCAGAT AAAATTTCAG CAAGTGAACG GAAAAACCAC TTTGGCGAAA TCTATTGCGG GCTGGATCCA CAACAAGCGA CTTATGAGAG TGACCGCTGT GTTTATTGTG CCGAAAAAGC TAACTGCAAC TGGCATTGCC CGCTGCATAA CGCTATTCCG GATTACATCC GTCTGGTACA GGAGGGAAAG ATTATTGAAG CGGCAGAACT TTGCCACCAG ACCAGTTCCT TACCAGAAAT CTGCGGCAGG GTATGTCCAC AGGACCGTCT TTGTGAAGGC GCATGTACTT TGAAAGATCA CTCTGGCGCA GTCACTATCG GTAATCTGGA ACGCTACATC ACCGATACCG CGCTGGCGAT GGGCTGGCGT CCCGATGTCA GCAAAGTTGT TCCCCGTAGC GAAAAAGTGG CGGTGATTGG CGCTGGGCCA GCAGGGTTAG GGTGTGCTGA TATTCTGGCG CGCGCAGGAG TTCAGGTTGA TGTCTTTGAT CGCCATCCAG AAATTGGCGG TATGCTGACT TTTGGCATTC CTCCTTTCAA ACTCGATAAA ACGGTATTAA GCCAGCGGCG AGAGATATTC ACCGCAATGG GAATCGACTT TCATCTCAAC TGTGAAATTG GCCGCGATAT TACCTTTAGC GATTTAACTT CTGAATATGA TGCAGTTTTC ATCGGCGTGG GGACTTACGG GATGATGCGA GCAGATCTGC CGCATGAAGA TGCGCCCGGT GTCATTCAGG CTCTACCGTT CCTGACTGCC CATACCCGCC AGCTCATGGG ATTGCCGGAG TCTGAAGAGT ATCCGCTGAC GGACGTGGAA GGTAAGCGAG TCGTGGTATT GGGCGGTGGC GATACGACAA TGGATTGTTT GCGGACTTCC ATCCGCCTCA ATGCCGCCAG CGTGACCTGC GCGTATCGTC GTGATGAAGT CAGTATGCCG GGCTCGCGCA AAGAGGTGGT TAATGCGCGC GAGGAAGGTG TCGAGTTTCA TTTCAATGTT CAACCGCAAT ATATCGCTTG TGACGAAGAT GGGCGTTTAA CTGCGGTGGG CCTGATTCGT ACCGCCATGG GTGAGCCGGG GCCGGATGGT CGCCGTCGTC CTCGTCCGGT TGCGGGTTCA GAGTTTGAAT TGCCCGCCGA TGTTCTCATT ATGGCCTTTG GTTTCCAGGC GCATGCCATG CCGTGGTTGC AGGGCAGCGG AATTAAACTC GATAAATGGG GCCTGATTCA AACCGGTGAC GTCGGGTATT TACCTACCCA GACGCATCTG AAAAAAGTCT TTGCTGGTGG GGATGCAGTT CATGGCGCGG ATCTGGTTGT CACTGCAATG GCCGCAGGAA GGCAGGCGGC GCGCGATATG TTAACTCTGT TTGATACGAA GGCATCGTGA
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Protein sequence | MNKFIAAEAA ECIGCHACEI ACAVAHNQEN WPLSHSDFRP RIHVVGKGQA ANPVACHHCN NAPCVTACPV NALTFQSDSV QLDEQKCIGC KRCAIACPFG VVEMVDTIAQ KCDLCNQRSS GTQACIEVCP TQALRLMDDK GLQQIKVARQ RKTAAGNASS DAQPSRSAAL LPVNSRKGAD KISASERKNH FGEIYCGLDP QQATYESDRC VYCAEKANCN WHCPLHNAIP DYIRLVQEGK IIEAAELCHQ TSSLPEICGR VCPQDRLCEG ACTLKDHSGA VTIGNLERYI TDTALAMGWR PDVSKVVPRS EKVAVIGAGP AGLGCADILA RAGVQVDVFD RHPEIGGMLT FGIPPFKLDK TVLSQRREIF TAMGIDFHLN CEIGRDITFS DLTSEYDAVF IGVGTYGMMR ADLPHEDAPG VIQALPFLTA HTRQLMGLPE SEEYPLTDVE GKRVVVLGGG DTTMDCLRTS IRLNAASVTC AYRRDEVSMP GSRKEVVNAR EEGVEFHFNV QPQYIACDED GRLTAVGLIR TAMGEPGPDG RRRPRPVAGS EFELPADVLI MAFGFQAHAM PWLQGSGIKL DKWGLIQTGD VGYLPTQTHL KKVFAGGDAV HGADLVVTAM AAGRQAARDM LTLFDTKAS
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