Gene EcolC_0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0807 
Symbol 
ID6065924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp866843 
End bp867586 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content55% 
IMG OID641600212 
Producthypothetical protein 
Protein accessionYP_001723806 
Protein GI170018852 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.540927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATAG CACTTGTGAC TGGTGGCAGT CGCGGCATCG GGCGGGCAAC TGCATTACTG 
TTGGCGCAAG AAGGGTATAC GGTGGCGGTT AATTATCAGC AAAACCTCCA CGCGGCGCAG
GAAGTGATGA ACTTAATAAC GCAAGCCGGT GGCAAAGCAT TCGTGCTCCA GGCGGATATC
AGCGACGAAA ACCAGGTCGT TGCGATGTTT ACAGCAATCG ATCAGCACGA TGAACCGCTA
GCAGCGCTGG TCAATAACGC CGGGATCTTG TTTACCCAGT GCACCGTTGA AAACCTTACC
GCAGAGCGAA TCAACCGAGT ACTTTCCACC AACGTGACGG GATATTTTCT CTGCTGCCGC
GAGGCGGTAA AACGCATGGC GCTTAAAAAT GGTGGCAGTG GCGGCGCTAT CGTCAATGTC
TCTTCGGTGG CCTCACGGTT GGGTTCGCCA GGGGAATATG TTGATTACGC GGCATCGAAA
GGGGCGATTG ATACGTTAAC CACCGGACTA TCGCTGGAAG TCGCCGCGCA GGGGATCCGC
GTTAACTGCG TGCGGCCAGG GTTTATTTAT ACCGAAATGC ACGCCAGCGG CGGCGAGCCT
GGACGCGTCG ATCGCGTTAA GTCGAACATC CCCATGCAGC GTGGTGGACA GGCAGAAGAG
GTCGCGCAGG CCATTGTCTG GCTACTAAGT GATAAAGCCT CTTACGTCAC GGGAAGTTTT
ATCGATTTGG CGGGCGGGAA ATAA
 
Protein sequence
MAIALVTGGS RGIGRATALL LAQEGYTVAV NYQQNLHAAQ EVMNLITQAG GKAFVLQADI 
SDENQVVAMF TAIDQHDEPL AALVNNAGIL FTQCTVENLT AERINRVLST NVTGYFLCCR
EAVKRMALKN GGSGGAIVNV SSVASRLGSP GEYVDYAASK GAIDTLTTGL SLEVAAQGIR
VNCVRPGFIY TEMHASGGEP GRVDRVKSNI PMQRGGQAEE VAQAIVWLLS DKASYVTGSF
IDLAGGK