| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0797 |
|---|
| Symbol | |
|---|
| ID | 6066820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 854334 |
|---|
| End bp | 855566 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641600201 |
|---|
| Product | D-3-phosphoglycerate dehydrogenase |
|---|
| Protein accession | YP_001723796 |
|---|
| Protein GI | 170018842 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0331169 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGG TATCGCTGGA GAAAGACAAG ATTAAGTTTC TGCTGGTAGA AGGCGTGCAC
CAAAAGGCGC TGGAAAGCCT TCGTGCAGCT GGTTACACCA ACATCGAATT TCACAAAGGC
GCGCTGGATG ATGAACAATT AAAAGAATCC ATCCGCGATG CCCACTTCAT CGGCCTGCGA
TCCCGTACCC ATCTGACTGA AGACGTGATC AACGCCGCAG AAAAACTGGT CGCTATTGGC
TGTTTCTGTA TCGGAACAAA CCAGGTTGAT CTGGATGCGG CGGCAAAGCG CGGGATCCCG
GTATTTAACG CACCGTTCTC AAATACGCGC TCTGTTGCGG AGCTGGTGAT TGGCGAACTG
CTGCTGCTAT TGCGCGGCGT GCCGGAAGCC AATGCTAAAG CGCACCGTGG CGTGTGGAAC
AAACTGGCGG CGGGTTCTTT TGAAGCGCGC GGCAAAAAGC TGGGTATCAT CGGCTACGGT
CATATTGGTA CGCAATTGGG CATTCTGGCT GAATCGCTGG GAATGTATGT TTACTTTTAT
GATATTGAAA ACAAACTGCC GCTGGGCAAC GCCACTCAGG TACAGCATCT TTCTGACCTG
CTGAATATGA GCGATGTGGT GAGTCTGCAT GTACCAGAGA ATCCGTCCAC CAAAAATATG
ATGGGCGCGA AAGAAATTTC ACTAATGAAG CCCGGCTCGC TGCTGATTAA TGCTTCGCGC
GGTACTGTGG TGGATATTCC GGCGCTGTGT GATGCGCTGG CGAGCAAACA TCTGGCGGGG
GCGGCAATCG ACGTATTCCC GACGGAACCG GCGACCAATA GCGATCCATT TACCTCTCCG
CTGTGTGAAT TCGACAACGT CCTTCTGACG CCACACATTG GCGGTTCGAC TCAGGAAGCG
CAGGAGAATA TTGGCCTGGA AGTTGCGGGT AAATTGATCA AGTATTCTGA CAATGGCTCA
ACGCTCTCTG CGGTGAACTT CCCGGAAGTC TCGCTGCCAC TGCACGGTGG GCGTCGTCTG
ATGCACATCC ACGAAAACCG TCCGGGCGTG CTAACTGCGC TGAACAAAAT CTTCGCCGAG
CAGGGCGTCA ACATCGCCGC GCAATATCTA CAAACTTCCG CCCAGATGGG TTATGTGGTT
ATTGATATTG AAGCCGACGA AGACGTTGCC GAAAAAGCGC TGCAGGCAAT GAAAGCTATT
CCGGGTACCA TTCGCGCCCG TCTGCTGTAC TAA
|
|---|
| Protein sequence | MAKVSLEKDK IKFLLVEGVH QKALESLRAA GYTNIEFHKG ALDDEQLKES IRDAHFIGLR
SRTHLTEDVI NAAEKLVAIG CFCIGTNQVD LDAAAKRGIP VFNAPFSNTR SVAELVIGEL
LLLLRGVPEA NAKAHRGVWN KLAAGSFEAR GKKLGIIGYG HIGTQLGILA ESLGMYVYFY
DIENKLPLGN ATQVQHLSDL LNMSDVVSLH VPENPSTKNM MGAKEISLMK PGSLLINASR
GTVVDIPALC DALASKHLAG AAIDVFPTEP ATNSDPFTSP LCEFDNVLLT PHIGGSTQEA
QENIGLEVAG KLIKYSDNGS TLSAVNFPEV SLPLHGGRRL MHIHENRPGV LTALNKIFAE
QGVNIAAQYL QTSAQMGYVV IDIEADEDVA EKALQAMKAI PGTIRARLLY
|
|---|
| |