Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0778 |
Symbol | |
ID | 6066569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 833885 |
End bp | 835273 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641600182 |
Product | PTS system, mannitol-specific IIC subunit |
Protein accession | YP_001723777 |
Protein GI | 170018823 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2213] Phosphotransferase system, mannitol-specific IIBC component |
TIGRFAM ID | [TIGR00851] PTS system, mannitol-specific IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0229075 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACA AGTCTGCTCG TGCAAAGGTC CAGGCTTTTG GGGGCTTTTT GACTGCAATG GTCATCCCCA ATATTGGTGC TTTTATTGCC TGGGGTTTTA TTACTGCGTT ATTTATTCCC ACCGGTTGGC TGCCTAACGA ACATTTCGCC AAAATTGTCG GCCCGATGAT TACCTATTTA TTGCCCGTGA TGATTGGTTC TACCGGTGGT CATCTGGTCG GCGGTAAACG CGGCGCGGTC ATGGGCGGAA TAGGTACTAT TGGTGTGATC GTCGGCGCAG AGATCCCGAT GTTCCTTGGC TCAATGATTA TGGGGCCGCT CGGTGGGCTG GTCATAAAAT ATGTTGATAA GGCACTGGAA AAACGCATAC CTGCTGGTTT TGAGATGGTT ATCAATAACT TCTCATTAGG TATCGCGGGG ATGCTCCTTT GTCTGCTGGG TTTTGAAGTG ATCGGCCCGG CGGTGTTAAT TGCCAATACT TTCGTCAAAG AGTGTATTGA GGCGCTGGTA CATGCGGGTT ATCTGCCATT GTTGTCAGTC ATCAATGAAC CGGCGAAAGT GCTTTTCCTC AATAATGCGA TCGATCAGGG CGTCTATTAT CCGCTGGGAA TGCAACAGGC TTCGGTTAAC GGTAAATCCA TCTTCTTTAT GGTGGCCTCT AACCCAGGTC CGGGCCTGGG GCTGCTGCTG GCGTTTACCT TGTTTGGTAA AGGGATGAGT AAACGTTCTG CGCCCGGGGC GATGATTATT CACTTCCTCG GTGGGATCCA CGAACTGTAT TTCCCGTATG TGCTGATGAA GCCGCTGACC ATTATTGCCA TGATTGCGGG CGGTATGTCT GGCACCTGGA TGTTTAACTT ACTGGACGGT GGTCTGGTGG CTGGCCCAAG TCCGGGGTCT ATCTTTGCTT ACCTGGCACT GACGCCGAAA GGCTCGTTCC TGGCGACAAT TGCCGGTGTT ACGGTAGGTA CCCTGGTGTC CTTTGCTATT ACTTCGCTGA TACTGAAGAT GGAAAAAACG GTGGAAACGG AGAGCGAAGA TGAGTTTGCT CAGTCAGCCA ATGCGGTTAA GGCGATGAAA CAAGAGGGTG CATTCTCGTT AAGCAGGGTT AAGCGTATCG CCTTTGTTTG CGATGCGGGG ATGGGCTCCA GTGCGATGGG CGCGACCACC TTCCGTAAAC GCCTGGAAAA AGCGGGGCTG GCAATTGAAG TAAAACATTA CGCCATAGAA AACGTGCCTG CGGATGCGGA TATCGTCGTT ACTCATGCCA GTCTGGAAGG GCGCGTGAAA CGTGTGACGG ATAAACCACT GATATTGATT AATAACTATA TTGGCGATCC AAAACTCGAC ACTTTATTTA ATCAATTAAC CGCCGAACAT AAACACTGA
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Protein sequence | MENKSARAKV QAFGGFLTAM VIPNIGAFIA WGFITALFIP TGWLPNEHFA KIVGPMITYL LPVMIGSTGG HLVGGKRGAV MGGIGTIGVI VGAEIPMFLG SMIMGPLGGL VIKYVDKALE KRIPAGFEMV INNFSLGIAG MLLCLLGFEV IGPAVLIANT FVKECIEALV HAGYLPLLSV INEPAKVLFL NNAIDQGVYY PLGMQQASVN GKSIFFMVAS NPGPGLGLLL AFTLFGKGMS KRSAPGAMII HFLGGIHELY FPYVLMKPLT IIAMIAGGMS GTWMFNLLDG GLVAGPSPGS IFAYLALTPK GSFLATIAGV TVGTLVSFAI TSLILKMEKT VETESEDEFA QSANAVKAMK QEGAFSLSRV KRIAFVCDAG MGSSAMGATT FRKRLEKAGL AIEVKHYAIE NVPADADIVV THASLEGRVK RVTDKPLILI NNYIGDPKLD TLFNQLTAEH KH
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