Gene EcolC_0768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0768 
Symbol 
ID6064919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp820867 
End bp821598 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content53% 
IMG OID641600172 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_001723767 
Protein GI170018813 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000951962 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000313548 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGTATCC CCCGCATTTA TCATCCTGAA CCACTGACCA GCCATTCTCA CATCGCGCTT 
TGCGAAGATG CCGCCAACCA TATCGGGCGC GTACTGCGCA TGGGGCCGGG GCAGGCGTTG
CAATTGTTTG ACGGTAGCAA CCAGGTCTTT GACGCCGAAA TTACCAGCGC CAGCAAAAAA
AGCGTGGAAG TGAAGGTGCT GGAAGGCCAG ATCGACGATC GCGAATCTCC GCTGCATATT
CACCTCGGTC AGGTGATGTC GCGTGGTGAA AAAATGGAAT TTACTATCCA GAAATCGATC
GAACTCGGTG TAAGCCTCAT TACGCCACTT TTTTCTGAGC GCTGCGGCGT TAAACTGGAT
AGTGAACGTC TGAACAAGAA GCTTCAGCAG TGGCAGAAGA TTGCAATTGC TGCCTGTGAG
CAGTGTGGTC GTAACCGGGT GCCGGAAATC CGTCCAGCGA TGGATCTGGA AGCCTGGTGT
GCAGAGCAGG ATGAAGGACT GAAACTGAAT CTTCACCCGC GCGCCAGTAA CAGCATCAAT
ACGTTGCCGT TACCGGTTGA ACGCGTCCGC CTGCTGATTG GCCCGGAAGG CGGTTTATCG
GCAGATGAAA TTGCCATGAC TGCCCGCTAT CAATTTACTG ATATCCTGTT GGGACCTCGC
GTTTTGCGTA CAGAGACAAC TGCGCTCACC GCCATTACCG CGCTACAAGT ACGATTTGGC
GATTTGGGCT AA
 
Protein sequence
MRIPRIYHPE PLTSHSHIAL CEDAANHIGR VLRMGPGQAL QLFDGSNQVF DAEITSASKK 
SVEVKVLEGQ IDDRESPLHI HLGQVMSRGE KMEFTIQKSI ELGVSLITPL FSERCGVKLD
SERLNKKLQQ WQKIAIAACE QCGRNRVPEI RPAMDLEAWC AEQDEGLKLN LHPRASNSIN
TLPLPVERVR LLIGPEGGLS ADEIAMTARY QFTDILLGPR VLRTETTALT AITALQVRFG
DLG