Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0764 |
Symbol | |
ID | 6065216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 817652 |
End bp | 818632 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641600168 |
Product | twitching motility protein |
Protein accession | YP_001723763 |
Protein GI | 170018809 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.160619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000267931 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATATGG AAGAAATTGT GGCCCTTAGT GTAAAGCATA ACGTCTCGGA TCTACACCTG TGCAGCGCCT GGCCCGCACG ATGGCGCATT CGCGGGCTAA TGGAAGCTGC GCCGTTTGAT GCGCCGGACG TCGAAGAGCT ACTGCGGGAG TGGCTGGATG ACGATCAGCG GGCAATATTG CTGGAAAATG GCCAGCTGGA TTTTGCCGTG TCGCTGGCGG AAAACCAGCG GTTGCGTGGC AGTGCGTTCG CGCAACGGCA AGGTATTTCT CTGGCATTAC GGTTGTTACC TTCGCACTGT CCACAGCTCG AACAGCTTGG TGCGCCACCG GTATTGCCGG AATTACTCAA GAGCGAGAAT GGCATGATTC TGGTGACGGG GGCGACGGGG AGTGGCAAAT CTACCACGCT GGCGGCGATG GTTGGCTATC TTAATCAACA TGCCGATGCG CATATTCTGA CGCTGGAAGA TCCTGTGGAA TATCTCTATG CCAGCCAGCG ATGTTTGATC CAGCAGCGGG AAATTGGTTT GCACTGTATG ACGTTCGCAT CGGGGTTGCG GGCCGCATTG CGGGAAGATC CTGATGTGAT TTTGCTCGGA GAGCTACGTG ACAGTGAGAC AATCCGTCTG GCGCTGACGG CGGCAGAAAC CGGGCATCTG GTGCTGGCAA CCTTACATAC ACGTGGTGCC GCGCAGGCAG TTGAGCGACT GGTGGATTCA TTTCCGGCGC AGGAAAAAGA CCCCGTGCGT AATCAACTGG CAGGTAGTTT ACGGGCAGTG CTGTCACAAA AGCTGGAAGT GGATAAACAG GAAGGACGCG TGGCGCTATT TGAATTGCTG ATTAACACAC CCGCGGTGGG GAATTTGATT CGTGAAGGGA AAACCCACCA GTTACCGCAT GTTATTCAAA CCGGGCAGCA GGTGGGGATG ATAACGTTTC AGCAGAGTTA TCAGCACCGG GTGGGGGAAG GGCGTTTGTG A
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Protein sequence | MNMEEIVALS VKHNVSDLHL CSAWPARWRI RGLMEAAPFD APDVEELLRE WLDDDQRAIL LENGQLDFAV SLAENQRLRG SAFAQRQGIS LALRLLPSHC PQLEQLGAPP VLPELLKSEN GMILVTGATG SGKSTTLAAM VGYLNQHADA HILTLEDPVE YLYASQRCLI QQREIGLHCM TFASGLRAAL REDPDVILLG ELRDSETIRL ALTAAETGHL VLATLHTRGA AQAVERLVDS FPAQEKDPVR NQLAGSLRAV LSQKLEVDKQ EGRVALFELL INTPAVGNLI REGKTHQLPH VIQTGQQVGM ITFQQSYQHR VGEGRL
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