Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0710 |
Symbol | |
ID | 6065882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 762160 |
End bp | 763509 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641600116 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_001723712 |
Protein GI | 170018758 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGGGTT TTAACATCAA ACTTTGGTTT GCAGATGGCG CGTTTCGCAC CATTATTCGC AATAGCGCCT GGTTAGGCTC CAGTAATGTC GTGAGCGCCT TGCTGGGTCT GTTGGCGCTC TCGTGTGCCG GTAAAGGGAT GACGCCCGCC ATGTTTGGCG TACTGGTGAT TGTGCAATCG TACGCCAAGT CGATCAGCGA TTTTATTAAG TTTCAGACAT GGCAACTGGT GGTTCAGTAC GGAACACCAG CATTAACCAA CAATAATCCG CAGCAATTCC GCAATGTCGT CTCATTTTCC TTCTCGCTGG ATATCGTCAG CGGCGCGGTG GCGATTGTCG GTGGCATTGC CTTACTGCCA TTCCTTTCCC ATTCATTAGG TCTGGATGAC CAAAGTTTTT GGCTGGCAGC GCTCTATTGC ACGCTCATTC CTTCAATGGC TTCCTCCACG CCGACCGGCA TTCTGCGTGC GGTAGATCGC TTCGATTTAA TTGCTGTACA GCAGGCGACG AAACCTTTTC TGCGCGCAGC GGGGAGCGTC GTAGCCTGGT ATTTTGACTT TGGTTTTGCG GGTTTTGTTA TTGCCTGGTA CGTGTCGAAT CTGGTTGGCG GCACCATGTA CTGGTGGTTT GCCGCGCGCG AATTACGCCG CCGAAATATC CATAACGCCT TCAAATTGAA TCTGTTTGAG TCTGCCCGAC ACATTAAAGG CGCGTGGAGT TTTGTCTGGT CAACCAACAT TGCCCACTCC ATCTGGTCGG CGCGTAACTC GTGCAGCACA GTGTTGGTGG GGATCGTGTT AGGACCCGCT GCCGCCGGGT TATTTAAAAT CGCCATGACA TTCTTCGACG CCGCCGGAAC GCCAGCGGGT TTGCTGGGTA AAAGTTTTTA CCCAGAGGTG ATGCGTTTAG ATCCGCGCAC CACCAGACCG TGGTTGTTAG GTGTGAAGTC CGGTTTACTG GCGGGCGGAA TCGGTATTCT GATGGCGCTC GCGGTGTTGA TCGTCGGCAA GCCGCTCATT TCGCTGGTGT TTGGCGTTAA GTATCTCGAA GCGTATGACC TGATTCAGGT GATGCTGGGC GCAATTGTGA TTTCGATGCT GGGCTTCCCT CAGGAGTCAT TGCTATTGAT GGCGGGAAAA CAGCGCGCTT TTCTCGTGGC GCAAACCATC GCCTCAATCG GCTACATCGT ATTGCTGTTC ATGTTCTGTC ATCTGTTTGG TGTGCTGGGA GCAGCGTTTG CTTACTTCGG TGGGCAATGT CTGGACGTGG CGCTCTCGTT AATTCCAACC TTAAAGGCAT TTTTTCAGCG CCATTCCTTG CTTTATAACG CAGCCGGAGA GAAATCCTGA
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Protein sequence | MAGFNIKLWF ADGAFRTIIR NSAWLGSSNV VSALLGLLAL SCAGKGMTPA MFGVLVIVQS YAKSISDFIK FQTWQLVVQY GTPALTNNNP QQFRNVVSFS FSLDIVSGAV AIVGGIALLP FLSHSLGLDD QSFWLAALYC TLIPSMASST PTGILRAVDR FDLIAVQQAT KPFLRAAGSV VAWYFDFGFA GFVIAWYVSN LVGGTMYWWF AARELRRRNI HNAFKLNLFE SARHIKGAWS FVWSTNIAHS IWSARNSCST VLVGIVLGPA AAGLFKIAMT FFDAAGTPAG LLGKSFYPEV MRLDPRTTRP WLLGVKSGLL AGGIGILMAL AVLIVGKPLI SLVFGVKYLE AYDLIQVMLG AIVISMLGFP QESLLLMAGK QRAFLVAQTI ASIGYIVLLF MFCHLFGVLG AAFAYFGGQC LDVALSLIPT LKAFFQRHSL LYNAAGEKS
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