Gene EcolC_0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0702 
Symbol 
ID6066600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp754250 
End bp754591 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content55% 
IMG OID641600108 
Producthydrogenase nickel incorporation protein HybF 
Protein accessionYP_001723704 
Protein GI170018750 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAGT TGTCTCTTTG CCAGAGCGCC GTTGAAATTA TCCAACGGCA GGCGGAGCAG 
CACGATGTTA AGCGCGTCAC CGCCGTGTGG CTGGAAATTG GCGCGCTCTC CTGCGTTGAG
GAGAGCGCCG TCCGTTTTAG TTTTGAAATT GTCTGCCACG GAACGGTGGC GCAAGGGTGC
GATTTACATA TCGTCTATAA ACCCGCCCAG GCCTGGTGCT GGGATTGCAG CCAGGTGGTG
GAGATTCATC AGCACGATGC GCAGTGTCCG CTCTGTCACG GCGAGCGGTT GCGTGTCGAT
ACCGGCGATT CGCTGATCGT CAAAAGTATT GAAGTTGAAT AA
 
Protein sequence
MHELSLCQSA VEIIQRQAEQ HDVKRVTAVW LEIGALSCVE ESAVRFSFEI VCHGTVAQGC 
DLHIVYKPAQ AWCWDCSQVV EIHQHDAQCP LCHGERLRVD TGDSLIVKSI EVE