Gene EcolC_0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0676 
Symbol 
ID6066535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp726321 
End bp726716 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content42% 
IMG OID641600083 
ProductXRE family transcriptional regulator 
Protein accessionYP_001723679 
Protein GI170018725 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.269723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGTC CGGTTTGCCA CCAGGGAGAA ATGGTTTCTG GCATTAAAGA TATTCCATAC 
ACCTTCCGTG GACGAAAAAC AGTATTGAAA GGTATCCACG GTTTATATTG TGTCCATTGC
GAAGAGAGCA TCATGAATAA AGAAGAGTCA GATGCTTTCA TGGCGCAAGT AAAGGCATTT
CGGGCTTCGG TGAATGCCGA AACAGTGGCA CCTGAATTTA TAGTGAAGGT TCGAAAAAAG
CTCTCTCTTA CCCAAAAAGA GGCAAGCGAA ATTTTTGGGG GAGGTGTAAA TGCGTTTTCG
CGTTACGAAA AAGGCAATGC CCAACCTCAT CCTTCCACAA TCAAACTTTT ACGTGTTCTG
GATAAGCATC CAGAACTATT GAATGAAATC CGTTAA
 
Protein sequence
MKCPVCHQGE MVSGIKDIPY TFRGRKTVLK GIHGLYCVHC EESIMNKEES DAFMAQVKAF 
RASVNAETVA PEFIVKVRKK LSLTQKEASE IFGGGVNAFS RYEKGNAQPH PSTIKLLRVL
DKHPELLNEI R