Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0654 |
Symbol | |
ID | 6066382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 708605 |
End bp | 709156 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641600061 |
Product | putative fimbrial protein |
Protein accession | YP_001723657 |
Protein GI | 170018703 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.608236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCTT TTAAAAAGTC ACTTCTTGTT GCTGGTGTAG CAATGATTCT TTCCAATAAC GTGTTTGCTG ATGAAGGTCA CGGTATTGTT AAATTTAAAG GTGAAGTTAT CTCTGCTCCA TGTTCTATTA AACCAGGTGA CGAAGATTTA ACTGTAAATC TGGGTGAAGT AGCAGATACC GTACTGAAAA GCGATCAGAA ATCTTTGGCG GAACCTTTCA CTATTCACCT GCAGGACTGC ATGCTGAGTC AGGGTGGAAC TACTTATTCA AAAGCGAAGG TTACTTTCAC TACAGCAAAT ACCATGACGG GTCAGTCTGA TCTTCTGAAA AATACCAAAG AAACTGAAAT CGGCGGCGCC ACTGGCGTTG GCGTACGTAT TCTGGACAGC CAGAGCGGCG AAGTAACTTT AGGTACTCCG GTAGTAATTA CGTTCAACAA TACCAACAGC TATCAGGAAC TGAATTTCAA AGCTCGTATG GAATCCCCAA GCAAAGATGC CACCCCGGGC AACGTTTACG CTCAGGCTGA CTACAAGATT GCTTACGAGT AA
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Protein sequence | MSAFKKSLLV AGVAMILSNN VFADEGHGIV KFKGEVISAP CSIKPGDEDL TVNLGEVADT VLKSDQKSLA EPFTIHLQDC MLSQGGTTYS KAKVTFTTAN TMTGQSDLLK NTKETEIGGA TGVGVRILDS QSGEVTLGTP VVITFNNTNS YQELNFKARM ESPSKDATPG NVYAQADYKI AYE
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