Gene EcolC_0644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0644 
Symbol 
ID6065678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp694081 
End bp694701 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content53% 
IMG OID641600051 
Productputative signal transduction protein 
Protein accessionYP_001723647 
Protein GI170018693 
COG category[T] Signal transduction mechanisms 
COG ID[COG3103] SH3 domain protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000398097 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAAT TACGCCTGAT CGGATTAACT TTACTCGCAC TTAGCGCGAC TGCCGTCTCA 
CACGCTGAAG AAACGCGCTA TGTTTCCGAC GAACTGAATA CCTGGGTCCG CAGCGGTCCG
GGAGATCATT ATCGCCTCGT GGGCACGGTT AACGCCGGCG AGGAAGTGAC CTTATTACAA
ACTGACGCCA ACACCAATTA TGCCCAGGTG AAAGACAGCT CTGGCCGTAC CGCCTGGATC
CCGTTGAAAC AACTTAGCAC TGAGCCAAGC CTGCGCTCCC GTGTGCCAGA TCTGGAAAAT
CAGGTCAAAA CCCTGACCGA TAAACTCACC AATATCGATA ACACCTGGAA TCAGCGCACC
GCAGAAATGC AGCAAAAAGT GGCGCAGAGC GACAGCGTGA TCAACGGGTT AAAAGAAGAA
AATCAGAAAC TGAAAAACGA GCTGATTGTC GCGCAGAAAA AGGTCGATGC CGCCAGCGTA
CAGCTGGATG ACAAACAGCG CACCATCATC ATGCAATGGT TTATGTATGG CGGTGGCGTG
CTGGGGCTTG GCTTGCTGCT CGGTCTGGTA CTGCCGCACC TGATCCCAAG CCGCAAACGC
AAAGATCGCT GGATGAACTA A
 
Protein sequence
MPKLRLIGLT LLALSATAVS HAEETRYVSD ELNTWVRSGP GDHYRLVGTV NAGEEVTLLQ 
TDANTNYAQV KDSSGRTAWI PLKQLSTEPS LRSRVPDLEN QVKTLTDKLT NIDNTWNQRT
AEMQQKVAQS DSVINGLKEE NQKLKNELIV AQKKVDAASV QLDDKQRTII MQWFMYGGGV
LGLGLLLGLV LPHLIPSRKR KDRWMN