Gene EcolC_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0643 
Symbolcca 
ID6067127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp692779 
End bp694017 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content56% 
IMG OID641600050 
Productmultifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 
Protein accessionYP_001723646 
Protein GI170018692 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00557262 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATTT ATCTGGTCGG TGGTGCTGTT CGGGATGCAT TGTTAGGGCT ACCGGTCAAA 
GACAGAGATT GGGTGGTGGT CGGCAGTACG CCACAGGAGA TGCTCGACGC GGGCTACCAG
CAGGTAGGCC GCGATTTTCC TGTGTTTCTG CATCCGCAAA CGCATGAAGA GTATGCGCTG
GCACGTACCG AACGGAAATC CGGTTCCGGT TACACCGGTT TTACTTGCTA TGCCGCACCG
GATGTCACGC TGGAAGATGA TCTTAAGCGT CGCGATCTGA CCATTAATGC GCTGGCCCAG
GACGATAACG GCGAGATTAT CGACCCGTAC AACGGTCTGG GCGATCTGCA AAATCGTCTG
TTGCGCCATG TTTCCCCCGC TTTTGGCGAA GATCCGTTAC GCGTATTGCG CGTGGCGCGT
TTTGCTGCGC GTTATGCCCA CCTCGGTTTT CGTATTGCCG ATGAAACTCT GGCGTTGATG
CGCGAGATGA CCCATGCGGG TGAACTGGAA CACCTGACGC CTGAACGGGT ATGGAAAGAG
ACGGAAAGCG CCCTCACCAC CCGCAATCCA CAGGTGTTCT TCCAGGTACT GCGCGATTGC
GGCGCACTGC GCGTTTTATT CCCGGAAATT GACGCACTGT TTGGCGTTCC GGCCCCTGCC
AAGTGGCATC CGGAAATCGA TACGGGTATT CATACCTTAA TGACGCTCTC AATGGCGGCG
ATGCTGAGTC CGCAGGTCGA TGTCCGTTTC GCAACTTTAT GCCACGATCT CGGTAAAGGG
CTGACGCCGC CAGAACTCTG GCCGCGTCAT CATGGTCATG GCCCGGCGGG TGTTAAGTTA
GTGGAACAAC TATGCCAGCG TCTGCGCGTG CCAAATGAAA TTCGCGATTT AGCCAGACTG
GTGGCTGAGT TTCACGATCT CATCCACACC TTCCCAATGC TGAACCCAAA AACCATCGTC
AAATTATTTG ATTCCATCGA TGCCTGGCGT AAACCGCAGC GTGTCGAGCA ACTGGCGCTG
ACCAGCGAGG CTGACGTGCG CGGCAGAACC GGTTTTGAAT CAGCGGACTA CCCGCAAGGC
CGCTGGTTGC GCGAAGCCTG GGAAGTGGCG CAGTCAGTGC CGACAAAAGC CGTCGTTGAA
GCGGGATTTA AAGGTGTGGA GATTCGCGAG GAGCTGACCC GACGGCGGAT TGCGGCGGTA
GCCAGCTGGA AGGAACAACG TTGCCCAAAG CCTGAATGA
 
Protein sequence
MKIYLVGGAV RDALLGLPVK DRDWVVVGST PQEMLDAGYQ QVGRDFPVFL HPQTHEEYAL 
ARTERKSGSG YTGFTCYAAP DVTLEDDLKR RDLTINALAQ DDNGEIIDPY NGLGDLQNRL
LRHVSPAFGE DPLRVLRVAR FAARYAHLGF RIADETLALM REMTHAGELE HLTPERVWKE
TESALTTRNP QVFFQVLRDC GALRVLFPEI DALFGVPAPA KWHPEIDTGI HTLMTLSMAA
MLSPQVDVRF ATLCHDLGKG LTPPELWPRH HGHGPAGVKL VEQLCQRLRV PNEIRDLARL
VAEFHDLIHT FPMLNPKTIV KLFDSIDAWR KPQRVEQLAL TSEADVRGRT GFESADYPQG
RWLREAWEVA QSVPTKAVVE AGFKGVEIRE ELTRRRIAAV ASWKEQRCPK PE