Gene EcolC_0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0639 
Symbol 
ID6065773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp689652 
End bp690584 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content50% 
IMG OID641600046 
Producttranscriptional activator TtdR 
Protein accessionYP_001723642 
Protein GI170018688 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000511538 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAATA GCTGGCCTTT AGCCAAAGAC TTGCAGGTAC TGGTAGAAAT CGTTCACAGC 
GGGAGTTTTA GCGCCGCAGC GGCGACGCTT GGGCAGACGC CTGCATTTGT CACCAAGCGG
ATCCAAATCC TTGAAAATAC GCTGGCAACA ACGCTGCTGA ACCGCTCCGC TCGCGGCGTG
GCGCTGACTG AAAGTGGCCA ACGTTGTTAC GAACATGCGT TGGAAATCCT CACCCAATAT
CAGCGACTGG TCGATGACGT CACGCAAATC AAAACGCGCC CGGAGGGGAT GATTCGTATT
GGTTGCAGTT TTGGTTTTGG GCGCAGCCAT ATTGCGCCAG CTATTACCGA ACTGATGCGC
AATTATCCTG AGTTACAGGT GCATTTTGAA TTGTTCGATC GGCAAATTGA TTTAGTGCAG
GATAATATTG ATCTGGATAT TCGTATTAAT GACGAAATTC CTGATTATTA TATTGCGCAT
CTTTTGACAA AAAATAAAAG AATATTATGC GCAGCACCTG AGTATCTGCA AAAATATCCG
CAGCCACAAT CCCTACAGGA ATTAAGTCGT CATGACTGTC TGGTGACCAA AGAGCGCGAT
ATGACCCATG GAATATGGGA GTTGGGGAAC GGTCAGGAGA AAAAATCGGT GAAGGTAAGC
GGGCATCTTT CCTCCAATAG CGGCGAGATT GTGCTGCAAT GGGCGCTGGA GGGCAAAGGG
ATTATGCTGC GTTCCGAGTG GGATGTGTTG CCGTTTCTGG AGAGTGGCAA ACTGGTGCAA
GTATTGCCAG AGTATGCACA AAGCGCCAAT ATCTGGGCTG TTTACCGGGA GCCGCTCTAT
CGCAGCATGA AATTACGTGT CTGCGTGGAA TTTCTGGCGG CATGGTGCCA GCAACGGCTG
GGCAAGCCCG ATGAAGGCTA TCAGGTCATG TAG
 
Protein sequence
MLNSWPLAKD LQVLVEIVHS GSFSAAAATL GQTPAFVTKR IQILENTLAT TLLNRSARGV 
ALTESGQRCY EHALEILTQY QRLVDDVTQI KTRPEGMIRI GCSFGFGRSH IAPAITELMR
NYPELQVHFE LFDRQIDLVQ DNIDLDIRIN DEIPDYYIAH LLTKNKRILC AAPEYLQKYP
QPQSLQELSR HDCLVTKERD MTHGIWELGN GQEKKSVKVS GHLSSNSGEI VLQWALEGKG
IMLRSEWDVL PFLESGKLVQ VLPEYAQSAN IWAVYREPLY RSMKLRVCVE FLAAWCQQRL
GKPDEGYQVM