| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0638 |
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| Symbol | |
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| ID | 6066378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 688534 |
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| End bp | 689445 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641600045 |
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| Product | tartrate dehydratase subunit alpha |
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| Protein accession | YP_001723641 |
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| Protein GI | 170018687 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000169351 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAGCG AAAGTAATAA GCAACAGGCA GTGAATAAGT TGACAGAGAT TGTCGCTAAC
TTTACCGCCA TGATTTCTAC CCGAATGCCT GATGACGTGG TGGATAAACT AAAACAGCTA
AAGGATGCCG AAACGTCGTC GATGGGGAAA ATTATCTACC ATACGATGTT CGACAACATG
CAAAAAGCGA TTGACCTGAA TCGTCCTGCC TGTCAGGACA CCGGGGAGAT TATGTTCTTC
GTTAAAGTCG GTTCCCGCTT CCCACTGCTT GGCGAGCTGC AAAGCATACT CAAACAAGCC
GTGGAAGAGG CAACCGTCAA AGCGCCACTA CGTCACAATG CGGTAGAAAT TTTTGACGAA
GTAAACACCG GCAAAAATAC CGGTAGCGGC GTACCGTGGG TCACCTGGGA CATCATCCCC
GACAATGACG ATGCGGAAAT CGAAGTTTAC ATGGCAGGCG GCGGCTGCAC GCTACCTGGC
CGCTCGAAAG TGTTAATGCC GTCAGAAGGC TACGAAGGCG TGGTGAAATT CGTCTTCGAA
AATATCTCCA CCCTCGCCGT AAACGCCTGT CCACCGGTAC TGGTGGGCGT GGGCATCGCC
ACCTCGGTGG AAACCGCCGC CGTACTCTCG CGTAAAGCCA TTTTGCGCCC GATTGGCAGC
CGCCATCCCA ATCCAAAAGC GGCAGAACTG GAGCTACGCC TGGAAGAAGG ACTCAACCGT
CTGGGGATTG GTCCACAAGG GCTGACCGGC AACAGTTCAG TGATGGGCGT ACATATCGAA
TCTGCCGCCC GCCATCCGTC AACCATCGGC GTTGCTGTCT CTACCGGCTG CTGGGCGCAT
CGTCGCGGCA CGCTGCTGGT TCATGCCGAT CTCACCTTTG AAAATCTGTC TCACACCCGG
AGCGCGTTAT GA
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| Protein sequence | MMSESNKQQA VNKLTEIVAN FTAMISTRMP DDVVDKLKQL KDAETSSMGK IIYHTMFDNM
QKAIDLNRPA CQDTGEIMFF VKVGSRFPLL GELQSILKQA VEEATVKAPL RHNAVEIFDE
VNTGKNTGSG VPWVTWDIIP DNDDAEIEVY MAGGGCTLPG RSKVLMPSEG YEGVVKFVFE
NISTLAVNAC PPVLVGVGIA TSVETAAVLS RKAILRPIGS RHPNPKAAEL ELRLEEGLNR
LGIGPQGLTG NSSVMGVHIE SAARHPSTIG VAVSTGCWAH RRGTLLVHAD LTFENLSHTR
SAL
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