Gene EcolC_0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0618 
Symbol 
ID6065310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp661765 
End bp662181 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content48% 
IMG OID641600024 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001723621 
Protein GI170018667 
COG category[K] Transcription 
COG ID[COG5499] Predicted transcription regulator containing HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCGA TTGCCGACAT CTTGCAAGCA GGAGAAAAGC TAACTGCTGT GGCACCTTTT 
CTGGCGGGTA TTCAGAACGA GGAACAATAC ACCCAGGCGC TGGAACTGGT AGATCATCTG
CTGCTCAACG ATCCTGAAAA CCCCTTGCTG GATCTGGTGT GTGCCAAAAT AACCGCGTGG
GAAGAATCAG CGCCCGAATT TGCGGAATTT AATGCCATGG CTCAAGCCAT GCCTGGCGGT
ATAGCCGTGA TTCGTACCCT TATGGATCAA TATGGTTTAA CCCTTTCCGA TCTGCCGGAA
ATTGGCAGTA AATCTATGGT GTCACGCGTT TTGAGCGGGA AGAGGAAATT AACGCTGGAA
CACGCTAAAA AATTGGCAAC GCGATTCGGC ATTTCTCCCG CCTTGTTTAT TGATTAA
 
Protein sequence
MIAIADILQA GEKLTAVAPF LAGIQNEEQY TQALELVDHL LLNDPENPLL DLVCAKITAW 
EESAPEFAEF NAMAQAMPGG IAVIRTLMDQ YGLTLSDLPE IGSKSMVSRV LSGKRKLTLE
HAKKLATRFG ISPALFID