Gene EcolC_0611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0611 
Symbol 
ID6065978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp654730 
End bp655974 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content55% 
IMG OID641600017 
Productserine/threonine transporter SstT 
Protein accessionYP_001723614 
Protein GI170018660 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3633] Na+/serine symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACGC AACGTTCACC GGGGCTATTC CGGCGTCTGG CTCATGGCAG CCTGGTAAAA 
CAAATCCTGG TCGGCCTTGT TCTGGGGATT CTTCTGGCAT GGATCTCAAA ACCCGCGGCG
GAAGCTGTTG GTCTGTTAGG TACTTTGTTC GTCGGCGCAC TGAAAGCCGT TGCCCCCATC
CTGGTGTTGA TGCTGGTGAT GGCATCTATT GCTAACCACC AGCACGGGCA GAAAACCAAT
ATCCGCCCTA TTTTGTTCCT CTATCTACTG GGCACCTTCT CTGCTGCTCT GGCCGCAGTA
GTCTTCAGCT TTGCCTTCCC TTCTACCCTG CATTTATCCA GTAGCGCGGG TGATATTTCG
CCGCCGTCAG GCATTGTCGA AGTGATGCGC GGGCTGGTAA TGAGCATGGT TTCCAACCCC
ATCGACGCGC TGCTGAAAGG TAACTACATC GGGATTCTGG TGTGGGCGAT CGGCCTCGGC
TTCGCACTGC GTCACGGTAA CGAGACCACC AAAAACCTGG TCAACGATAT GTCGAATGCC
GTCACCTTTA TGGTGAAACT GGTCATTCGC TTCGCACCGA TTGGTATTTT TGGTCTGGTT
TCTTCTACCC TGGCAACCAC CGGTTTCTCC ACACTGTGGG GCTACGCGCA ACTGCTGTTC
GTGCTGGTTG GCTGCATGTT AATGGTGGCG CTGGTGGTTA ACCCATTGCT GGTGTGGTGG
AAAATTCGTC GTAACCCGTT CCCGCTGGTG CTGCTGTGCC TGCGCGAAAG CGGTGTGTAT
GCCTTCTTCA CCCGCAGCTC TGCAGCGAAC ATTCCGGTGA ATATGGCGCT GTGTGAAAAG
CTGAATCTGG ATCGCGATAC CTATTCCGTT TCTATTCCGC TGGGAGCCAC CATCAATATG
GCGGGCGCAG CAATCACTAT TACCGTGTTG ACGCTGGCTG CGGTTAATAC GCTGGGTATT
CCGGTCGATC TGCCCACGGC GCTGCTGTTG AGCGTGGTGG CTTCTCTGTG TGCCTGTGGC
GCATCCGGCG TGGCGGGGGG GTCTCTGCTG CTGATCCCAC TGGCCTGTAA TATGTTCGGT
ATTTCGAACG ATATCGCCAT GCAGGTGGTT GCCGTCGGCT TTATCATCGG CGTATTGCAG
GACTCTTGCG AAACCGCGCT GAACTCTTCA ACTGACGTGC TGTTCACTGC GGCAGCTTGC
CAGGCAGAAG ACGATCGTCT GGCAAATAGC GCCCTGCGTA ATTAA
 
Protein sequence
MTTQRSPGLF RRLAHGSLVK QILVGLVLGI LLAWISKPAA EAVGLLGTLF VGALKAVAPI 
LVLMLVMASI ANHQHGQKTN IRPILFLYLL GTFSAALAAV VFSFAFPSTL HLSSSAGDIS
PPSGIVEVMR GLVMSMVSNP IDALLKGNYI GILVWAIGLG FALRHGNETT KNLVNDMSNA
VTFMVKLVIR FAPIGIFGLV SSTLATTGFS TLWGYAQLLF VLVGCMLMVA LVVNPLLVWW
KIRRNPFPLV LLCLRESGVY AFFTRSSAAN IPVNMALCEK LNLDRDTYSV SIPLGATINM
AGAAITITVL TLAAVNTLGI PVDLPTALLL SVVASLCACG ASGVAGGSLL LIPLACNMFG
ISNDIAMQVV AVGFIIGVLQ DSCETALNSS TDVLFTAAAC QAEDDRLANS ALRN