Gene EcolC_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0602 
Symbol 
ID6065487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp643130 
End bp643906 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content51% 
IMG OID641600008 
ProductDNA-binding transcriptional repressor ExuR 
Protein accessionYP_001723605 
Protein GI170018651 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCA CTGAACCACG CCGTTTGTAT CAACAACTTG CCGCTGACCT GAAAGAGCGC 
ATCGAACAGG GCGTCTATCT GGTGGGTGAT AAACTGCCTG CCGAGCGCTT TATTGCCGAT
GAAAAGAACG TCAGCCGTAC GGTAGTTCGT GAAGCCATCA TCATGCTGGA AGTTGAAGGC
TATGTCGAAG TGCGTAAAGG TTCAGGTATT CATGTAGTTT CCAACCAGCC GCGCCATCAG
CAGGCGGCTG ACACTAATAT GGAATTCGCT AATTACGGTC CGTTTGAGTT ACTTCAGGCT
CGCCAGCTCA TCGAAAGTAA TATTGCCGAG TTCGCAGCAA CTCAGGTAAC GAAACAGGAC
ATCATGAAAT TGATGGCCAT CCAGGAGCAG GCGCGAGGCG AACAATGCTT CCGTGATTCC
GAGTGGGATT TGCAGTTCCA TATTCAGGTA GCCCTGGCGA CGCAGAACTC CGCCCTGGCG
GCTATCGTTG AAAAAATGTG GACCCAGCGT AGCCATAACC CGTACTGGAA AAAACTGCAC
GAACACATTG ATTCCCGTAC CGTCGATAAC TGGTGTGATG ACCACGATCA AATCCTCAAG
GCGCTGATTC GCAAAGATCC TCATGCTGCT AAGCTGGCAA TGTGGCAGCA CCTGGAAAAC
ACCAAGATCA TGTTATTCAA CGAAACCAGC GACGACTTCG AGTTCAATGC CGACCGCTAT
CTATTCGCCG AAAACCCGGT GGTGCATCTC GATACAGCCA CCAGCGGCAG TAAATGA
 
Protein sequence
MEITEPRRLY QQLAADLKER IEQGVYLVGD KLPAERFIAD EKNVSRTVVR EAIIMLEVEG 
YVEVRKGSGI HVVSNQPRHQ QAADTNMEFA NYGPFELLQA RQLIESNIAE FAATQVTKQD
IMKLMAIQEQ ARGEQCFRDS EWDLQFHIQV ALATQNSALA AIVEKMWTQR SHNPYWKKLH
EHIDSRTVDN WCDDHDQILK ALIRKDPHAA KLAMWQHLEN TKIMLFNETS DDFEFNADRY
LFAENPVVHL DTATSGSK