Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0582 |
Symbol | |
ID | 6066130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 625543 |
End bp | 626874 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641599988 |
Product | threonine/serine transporter TdcC |
Protein accession | YP_001723585 |
Protein GI | 170018631 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.090832 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACTT CAGATAGCAT TGTATCCAGC CAGACAAAAC AATCGTCCTG GCGTAAATCA GATACCACAT GGACGTTAGG CTTGTTTGGT ACGGCAATCG GCGCCGGGGT GCTGTTCTTC CCTATCCGCG CAGGTTTTGG CGGACTGATC CCGATTCTTC TGATGTTGGT ATTGGCATAC CCCATCGCGT TTTATTGCCA CCGGGCGCTG GCGCGTCTGT GTCTTTCTGG CTCTAACCCT TCCGGCAACA TTACGGAAAC GGTGGAAGAG CATTTTGGTA AAACTGGCGG CGTGGTTATC ACGTTCCTGT ACTTCTTCGC GATTTGCCCA CTGCTGTGGA TTTATGGCGT TACTATTACC AATACCTTTA TGACGTTCTG GGAAAACCAG CTCGGCTTTG CACCGCTGAA TCGCGGCTTT GTGGCGCTGT TCCTGTTGCT GCTGATGGCT TTCGTCATCT GGTTTGGTAA GGATCTGATG GTTAAAGTGA TGAGCTACCT GGTATGGCCG TTTATCGCCA GCCTGGTGCT GATTTCTTTG TCGCTGATCC CTTACTGGAA CTCTGCAGTT ATCGACCAGG TTGACCTCGG TTCGCTGTCG TTAACCGGTC ATGACGGTAT CCTGATCACT GTCTGGCTGG GGATTTCCAT CATGGTTTTC TCCTTTAACT TCTCGCCAAT CGTCTCTTCC TTCGTGGTTT CTAAACGTGA AGAGTATGAG AAAGACTTCG GTCGCGACTT CACCGAACGT AAATGTTCCC AAATCATTTC TCGTGCCAGC ATGCTGATGG TTGCAGTGGT GATGTTCTTT GCCTTTAGCT GCCTGTTTAC TCTGTCTCCG GCCAACATGG CGGAAGCCAA AGCGCAGAAT ATTCCAGTGC TTTCTTATCT GGCTAACCAC TTTGCGTCCA TGACCGGTAC CAAAACAACG TTCGCGATTA CACTGGAATA TGCGGCTTCC ATCATCGCAC TCGTGGCTAT CTTCAAATCT TTCTTCGGTC ACTATCTGGG GACGCTGGAA GGCTTGAATG GTCTGATTCT GAAGTTCGGT TATAAAGGTG ACAAAACCAA AGTGTCGCTG GGTAAACTGA ATACTCTCAG CATGATCTTC ATCATGGGCT CCACCTGGGT TGTTGCCTAC GCCAACCCGA ACATCCTCGA CCTGATTGAA GCCATGGGCG CACCGATTAT CGCATCCCTG CTGTGCCTGT TGCCGATGTA TGCCATCCGT AAAGCGCCGT CTCTGGCGAA ATACCGTGGT CGTCTGGATA ACGTGTTTGT TACCGTGATT GGTCTGCTGA CCATCCTGAA CATCGTATAC AAACTGTTTT AA
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Protein sequence | MSTSDSIVSS QTKQSSWRKS DTTWTLGLFG TAIGAGVLFF PIRAGFGGLI PILLMLVLAY PIAFYCHRAL ARLCLSGSNP SGNITETVEE HFGKTGGVVI TFLYFFAICP LLWIYGVTIT NTFMTFWENQ LGFAPLNRGF VALFLLLLMA FVIWFGKDLM VKVMSYLVWP FIASLVLISL SLIPYWNSAV IDQVDLGSLS LTGHDGILIT VWLGISIMVF SFNFSPIVSS FVVSKREEYE KDFGRDFTER KCSQIISRAS MLMVAVVMFF AFSCLFTLSP ANMAEAKAQN IPVLSYLANH FASMTGTKTT FAITLEYAAS IIALVAIFKS FFGHYLGTLE GLNGLILKFG YKGDKTKVSL GKLNTLSMIF IMGSTWVVAY ANPNILDLIE AMGAPIIASL LCLLPMYAIR KAPSLAKYRG RLDNVFVTVI GLLTILNIVY KLF
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