| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0556 |
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| Symbol | |
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| ID | 6065063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 600350 |
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| End bp | 600934 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641599963 |
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| Product | fimbrial protein |
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| Protein accession | YP_001723560 |
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| Protein GI | 170018606 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.710135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAAG GTACAAAAAT AGCCATTGCG GGCTTACTTG CGCTTTTCGC AGGTAATGCC
GCTGCAACAG ATGGTGAAAT AGTTTTTGAT GGCGAGATTT TAAAATCCGC TTGTGAAATC
AATGACTCTG ATAAGAAAAT TGAAGTTGCT CTTGGTCACT ATAATGCCGA ACAGTTTCGT
TCTGTTGGCG ATCGTAGCCC AAAAATTCCA TTCACTATTC CTTTAGTTAA CTGCCCAATG
ACTGGGTGGG AGCACGATAA CGGCAACGTT GAAGCGTCTT TCCGTCTATG GCTAGAAACG
CGGGATAATG GTACCGTTCC TAACTTCCCT AATCTGGCAA AAGTAGGCTC TTTTGCTGGC
ATAGCGGCAA CAGGTGTGGG TATCCGTATT GACGATGCGG AAAGCGGAAA CATTATGCCA
CTGAATGCTA TGGGCAATGA TAACACGGTT TATCAGATCC CGGCGGACTC CAATGGTATT
GTCAATGTTG ACCTCATCGC TTACTACGTA TCAACCGTTG AAGCATCAGA AATCACCCCA
GGGGAAGCAG ACGCTGTCGT TAACGTAACG CTGGATTACC GTTAA
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| Protein sequence | MNKGTKIAIA GLLALFAGNA AATDGEIVFD GEILKSACEI NDSDKKIEVA LGHYNAEQFR
SVGDRSPKIP FTIPLVNCPM TGWEHDNGNV EASFRLWLET RDNGTVPNFP NLAKVGSFAG
IAATGVGIRI DDAESGNIMP LNAMGNDNTV YQIPADSNGI VNVDLIAYYV STVEASEITP
GEADAVVNVT LDYR
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