Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0555 |
Symbol | |
ID | 6065003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 599575 |
End bp | 600270 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641599962 |
Product | pili assembly chaperone |
Protein accession | YP_001723559 |
Protein GI | 170018605 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.970343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAC GAACATTCGC GGTGATATTA ACCTTGTTGT GTAGCTTCTG TATTGGCCAG GCGCTTGCAG GAGGAATCGT TTTACAGCGA ACGCGAGTGA TCTATGATGC CAGCCGCAAA GAGGCTGCGT TACCTGTCGC AAACAAAGGC GCAGAAACGC CTTATTTACT GCAATCATGG GTAGATAATA TAGATGGTAA AAGCCGTGCC CCATTTATTA TAACCCCACC GCTATTTCGT CTTGAGGCTG GCGATGACTC ATCACTGCGA ATTATTAAAA CAGCTGATAA CCTGCCTGAA AATAAAGAGT CGCTGTTCTA CATTAATGTT CGTGCCATTC CAGCAAAGAA AAAATCAGAT GATGTTAATG CTAACGAGTT GACGCTGGTA TTTAAAACAC GGATCAAAAT GTTTTATCGC CCCGCACACC TGAAGGGACG GGTAAACGAT GCGTGGAAAT CACTGGAATT TAAACGTAGT GATCATTCAC TCAATATATA TAACCCAACT GAATATTACG TCGTATTTGC CGGATTGGCA GTCGATAAAA TCGATCTCAC AAGCAAAATT GAATATATCG CGCCCGGAGA ACATAAACAG TTACCACTTC CTGCATCTGG CGGAAAGAAC GTGAAATGGG CTGCGATCAA TGATTATGGC GGCAGTTCCG GGACAGAAAC TCGTCCACTG CAATAA
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Protein sequence | MSKRTFAVIL TLLCSFCIGQ ALAGGIVLQR TRVIYDASRK EAALPVANKG AETPYLLQSW VDNIDGKSRA PFIITPPLFR LEAGDDSSLR IIKTADNLPE NKESLFYINV RAIPAKKKSD DVNANELTLV FKTRIKMFYR PAHLKGRVND AWKSLEFKRS DHSLNIYNPT EYYVVFAGLA VDKIDLTSKI EYIAPGEHKQ LPLPASGGKN VKWAAINDYG GSSGTETRPL Q
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