Gene EcolC_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0548 
Symbol 
ID6064852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp591376 
End bp591951 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content54% 
IMG OID641599955 
Producthypothetical protein 
Protein accessionYP_001723552 
Protein GI170018598 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.496742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAT TATCGCCAAT CGCAGTCCTT ATTTCCGCGC TGCTGTTGCA AGGTTGTGTT 
GCCGCTGCCG TAGTGGGTAC CGCTGCTGTG GGTACCAAAG CCGCAACTGA CCCACGCAGT
GTCGGCACCC AGGTGGACGA TGGTACCCTG GAAGTGCGCG TGAACAGCGC ATTGTCGAAA
GACGAACAGA TTAAGAAAGA AGCGCGCATT AATGTAACGG CCTATCAGGG CAAAGTGCTG
CTGGTTGGGC AGTCACCAAA TGCTGAACTT TCGGCTCGCG CCAAACAGAT TGCTATGGGC
GTAGACGGTG CCAACGAAGT GTATAACGAG ATTCGTCAGG GCCAGCCGAT TGGTCTGGGC
GAAGCATCTA ACGATACGTG GATCACCACC AAAGTGCGTT CGCAGCTCTT AACCAGCGAC
CTGGTGAAAT CGTCCAACGT GAAAGTGACC ACCGAAAACG GTGAAGTGTT CCTGATGGGG
CTGGTGACTG AACGTGAAGC GAAAGCGGCG GCAGATATTG CCAGCCGGGT GAGCGGCGTG
AAGCGGGTAA CTACGGCGTT TACGTTTATT AAATAG
 
Protein sequence
MKALSPIAVL ISALLLQGCV AAAVVGTAAV GTKAATDPRS VGTQVDDGTL EVRVNSALSK 
DEQIKKEARI NVTAYQGKVL LVGQSPNAEL SARAKQIAMG VDGANEVYNE IRQGQPIGLG
EASNDTWITT KVRSQLLTSD LVKSSNVKVT TENGEVFLMG LVTEREAKAA ADIASRVSGV
KRVTTAFTFI K