Gene EcolC_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0543 
Symbol 
ID6064799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp588092 
End bp588394 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content54% 
IMG OID641599950 
ProductGIY-YIG nuclease superfamily protein 
Protein accessionYP_001723547 
Protein GI229597231 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.792444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCT GGTTTCTTTA CTTGATCCGT ACCGCCGACA ATAAGCTTTA TACCGGGATC 
ACCACGGATG TCGAACGCCG CTATCAGCAG CACCAAAGCG GCAAAGGGGC GAAAGCACTG
CGCGGGAAAG GAGAACTGAC GCTGGCGTTT TCTGCTCCAG TGGGCGATCG TTCGCTGGCG
TTACGGGCGG AATATCGCGT TAAGCAACTG ACCAAACGGC AAAAAGAGCG TCTGGTAGCG
GAAGGCGCAG GGTTTGCAGA GCTGTTAAGC AGTCTGCAAA CCCCGGAGAT TAAAAGCGAT
TGA
 
Protein sequence
MTPWFLYLIR TADNKLYTGI TTDVERRYQQ HQSGKGAKAL RGKGELTLAF SAPVGDRSLA 
LRAEYRVKQL TKRQKERLVA EGAGFAELLS SLQTPEIKSD