Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0540 |
Symbol | |
ID | 6064736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 585880 |
End bp | 586875 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641599947 |
Product | peptidase U32 |
Protein accession | YP_001723544 |
Protein GI | 170018590 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.309606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCTGC TCTGCCCTGC CGGAAATCTC CCGGCGCTTA AGGCGGCCAT CGAAAACGGC GCAGATGCTG TTTATATCGG GCTAAAAGAT GATACCAATG CCCGTCACTT CGCCGGCCTT AACTTTACCG AGAAAAAATT GCAGGAAGCG GTGAGTTTTG TCCATCAACA TCGCCGCAAA CTTCACATCG CGATTAACAC TTTTGCGCAT CCGGACGGTT ACGCCCGTTG GCAGCGCGCC GTGGATATGG CGGCGCAGCT GGGTGCCGAC GCGCTGATCC TCGCCGACCT CGCCATGCTG GAGTACGCCG CCGAGCGTTA CCCGCATATT GAGCGTCATG TGTCAGTGCA GGCTTCGGCG ACCAATGAAG AGGCGATTAA CTTTTATCAT CGCCATTTTG ACGTTGCCCG CGTGGTGCTG CCGCGCGTGT TGTCGATTCA TCAGGTGAAA CAGCTGGCAC GGGTCACACC TGTACCACTG GAAGTCTTTG CTTTCGGCAG CCTGTGCATT ATGTCGGAAG GTCGTTGCTA TCTGTCGTCG TATCTGACGG GTGAGTCGCC CAACACCGTG GGCGCGTGTT CTCCGGCCCG TTTCGTGCGC TGGCAGCAAA CGCCGCAGGG GCTGGAATCC CGCCTGAACG AAGTGCTGAT CGACCGTTAT CAGGACGGCG AAAACGCAGG TTATCCGACG CTGTGTAAAG GGCGTTATCT GGTGGACGGC GAGCGCTATC ACGCGCTGGA AGAACCAACC AGTCTCAATA CCCTGGAACT GCTGCCGGAG TTAATGGCGG CGAATATTGC TTCGGTGAAA ATTGAAGGCC GCCAGCGTAG CCCGGCGTAT GTCAGCCAGG TGGCGAAAGT CTGGCGTCAG GCTATCGACC GTTGTAAGGC CGATCCGCAA AACTTCATAC CGCAAAGCGC GTGGATGGAG ACGCTCGGGT CGATGTCCGA AGGCACGCAA ACCACTCTTG GCGCATATCA CCGTAAATGG CAGTGA
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Protein sequence | MELLCPAGNL PALKAAIENG ADAVYIGLKD DTNARHFAGL NFTEKKLQEA VSFVHQHRRK LHIAINTFAH PDGYARWQRA VDMAAQLGAD ALILADLAML EYAAERYPHI ERHVSVQASA TNEEAINFYH RHFDVARVVL PRVLSIHQVK QLARVTPVPL EVFAFGSLCI MSEGRCYLSS YLTGESPNTV GACSPARFVR WQQTPQGLES RLNEVLIDRY QDGENAGYPT LCKGRYLVDG ERYHALEEPT SLNTLELLPE LMAANIASVK IEGRQRSPAY VSQVAKVWRQ AIDRCKADPQ NFIPQSAWME TLGSMSEGTQ TTLGAYHRKW Q
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