Gene EcolC_0522 details

Gene Information

• Locus tag: EcolC_0522
• Symbol: hflB
• ID: 6068720
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli ATCC 8739
• Kingdom: Bacteria
• Replicon accession: NC_010468
• Strand: +
• Start bp: 561425
• End bp: 563359
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641599927
• Product: ATP-dependent metalloprotease
• Protein accession: YP_001723526
• Protein GI: 170018572
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000177959
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: 6
• Fosmid unclonability p-value: 0.00179189
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCGAAAA ACCTAATACT CTGGCTGGTC ATTGCCGTTG TGCTGATGTC AGTATTCCAG 
AGCTTTGGGC CCAGCGAGTC TAATGGCCGT AAGGTGGATT ACTCTACCTT CCTACAAGAG 
GTCAATAACG ACCAGGTTCG TGAAGCGCGT ATCAACGGAC GTGAAATCAA CGTTACCAAG 
AAAGATAGTA ACCGTTATAC CACTTACATT CCGGTTCAGG ATCCGAAATT ACTGGATAAC 
CTGTTGACCA AGAACGTCAA GGTTGTCGGT GAACCGCCTG AAGAACCAAG CCTGCTGGCT 
TCTATCTTCA TCTCCTGGTT CCCGATGCTG TTGCTGATTG GTGTCTGGAT CTTCTTCATG 
CGTCAAATGC AGGGCGGCGG TGGCAAAGGT GCCATGTCGT TTGGTAAGAG CAAAGCGCGC 
ATGCTGACGG AAGATCAGAT CAAAACGACC TTTGCTGACG TTGCGGGCTG CGACGAAGCA 
AAAGAAGAAG TTGCTGAACT GGTTGAGTAT CTGCGCGAGC CGAGCCGCTT CCAGAAACTC 
GGCGGTAAGA TCCCGAAAGG CGTCTTGATG GTCGGTCCTC CGGGTACCGG TAAAACGCTG 
CTGGCGAAAG CGATTGCAGG CGAAGCGAAA GTTCCGTTCT TTACTATCTC CGGTTCTGAC 
TTCGTAGAAA TGTTCGTCGG TGTGGGTGCA TCCCGTGTTC GTGACATGTT CGAACAGGCG 
AAGAAAGCGG CACCGTGCAT CATCTTTATC GATGAAATCG ACGCCGTAGG CCGCCAGCGT 
GGCGCTGGTC TGGGCGGTGG TCACGATGAA CGTGAACAGA CTCTGAACCA GATGCTGGTT 
GAGATGGATG GCTTCGAAGG TAACGAAGGT ATCATCGTTA TCGCCGCGAC TAACCGTCCG 
GACGTTCTCG ACCCGGCCCT GCTGCGTCCT GGCCGTTTCG ACCGTCAGGT TGTGGTCGGC 
TTGCCAGATG TTCGCGGTCG TGAGCAGATC CTGAAAGTTC ACATGCGTCG CGTACCATTG 
GCACCCGATA TCGACGCGGC AATCATTGCC CGTGGTACTC CTGGTTTCTC CGGTGCTGAC 
CTGGCGAACC TGGTGAACGA AGCGGCACTG TTCGCTGCTC GTGGCAACAA ACGCGTTGTG 
TCGATGGTTG AGTTCGAGAA AGCGAAAGAC AAAATCATGA TGGGTGCGGA ACGTCGCTCC 
ATGGTGATGA CGGAAGCGCA GAAAGAATCG ACGGCTTACC ACGAAGCGGG TCATGCGATT 
ATCGGTCGCC TGGTGCCGGA ACACGATCCG GTGCACAAAG TGACGATTAT CCCACGCGGT 
CGTGCGCTGG GTGTGACTTT CTTCTTGCCT GAGGGCGACG CAATCAGCGC CAGCCGTCAG 
AAACTGGAAA GCCAGATTTC TACGCTGTAC GGTGGTCGTC TGGCAGAAGA GATCATCTAC 
GGGCCGGAAC ATGTATCTAC CGGTGCGTCC AACGATATTA AAGTTGCGAC CAACCTGGCA 
CGTAACATGG TGACTCAGTG GGGCTTCTCT GAGAAATTGG GTCCACTGCT GTACGCGGAA 
GAAGAAGGTG AAGTGTTCCT CGGCCGTAGC GTAGCGAAAG CGAAACATAT GTCCGATGAA 
ACTGCACGTA TCATCGACCA GGAAGTGAAA GCACTGATTG AGCGTAACTA TAATCGTGCG 
CGTCAGCTTC TGACCGACAA TATGGATATT CTGCATGCGA TGAAAGATGC TCTCATGAAA 
TATGAGACTA TCGACGCACC GCAGATTGAT GACCTGATGG CACGTCGCGA TGTACGTCCG 
CCAGCGGGCT GGGAAGAACC AGGCGCTTCT AACAATTCTG GCGACAATGG TAGTCCAAAG 
GCTCCTCGTC CGGTTGATGA ACCGCGTACG CCGAACCCGG GTAACACCAT GTCAGAGCAG 
TTAGGCGACA AGTAA 

 

Protein sequence

MAKNLILWLV IAVVLMSVFQ SFGPSESNGR KVDYSTFLQE VNNDQVREAR INGREINVTK 
KDSNRYTTYI PVQDPKLLDN LLTKNVKVVG EPPEEPSLLA SIFISWFPML LLIGVWIFFM 
RQMQGGGGKG AMSFGKSKAR MLTEDQIKTT FADVAGCDEA KEEVAELVEY LREPSRFQKL 
GGKIPKGVLM VGPPGTGKTL LAKAIAGEAK VPFFTISGSD FVEMFVGVGA SRVRDMFEQA 
KKAAPCIIFI DEIDAVGRQR GAGLGGGHDE REQTLNQMLV EMDGFEGNEG IIVIAATNRP 
DVLDPALLRP GRFDRQVVVG LPDVRGREQI LKVHMRRVPL APDIDAAIIA RGTPGFSGAD 
LANLVNEAAL FAARGNKRVV SMVEFEKAKD KIMMGAERRS MVMTEAQKES TAYHEAGHAI 
IGRLVPEHDP VHKVTIIPRG RALGVTFFLP EGDAISASRQ KLESQISTLY GGRLAEEIIY 
GPEHVSTGAS NDIKVATNLA RNMVTQWGFS EKLGPLLYAE EEGEVFLGRS VAKAKHMSDE 
TARIIDQEVK ALIERNYNRA RQLLTDNMDI LHAMKDALMK YETIDAPQID DLMARRDVRP 
PAGWEEPGAS NNSGDNGSPK APRPVDEPRT PNPGNTMSEQ LGDK