Gene EcolC_0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0506 
Symbol 
ID6068635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp549111 
End bp549893 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content55% 
IMG OID641599911 
Producthypothetical protein 
Protein accessionYP_001723510 
Protein GI170018556 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.182378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTAA ATGCGCTGGC GTCGCTCGGA CATAAAGGGA TTAAAACCCT GAGAACGTTC 
GGGCGGGCCG GGTTAATGTT ATTCAATGCG CTGGTCGGCA AACCGGAATT TCGCAAACAT
GCGCCGCTGC TGGTGCGCCA GCTCTATAAT GTCGGCGTCC TGTCGATGCT GATTATTGTG
GTTTCTGGCG TGTTCATCGG AATGGTGTTG GGGCTGCAAG GTTATCTGGT TCTGACCACT
TATAGTGCGG AAACCAGTCT GGGTATGCTG GTGGCGTTAT CGCTACTGCG TGAACTGGGG
CCGGTGGTTG CCGCGTTGTT GTTTGCCGGG CGTGCTGGTT CGGCGCTAAC CGCAGAAATC
GGCCTGATGC GCGCTACAGA GCAACTCTCC AGTATGGAGA TGATGGCGGT GGATCCGCTG
CGTCGGGTTA TTTCTCCCCG TTTCTGGGCT GGGGTTATTT CATTACCACT GTTGACGGTT
ATTTTCGTCG CCGTGGGGAT CTGGGGCGGA TCTCTGGTCG GCGTCAGTTG GAAAGGCATT
GATAGCGGGT TCTTCTGGTC GGCAATGCAA AATGCCGTCG ACTGGCGTAT GGATCTGGTC
AACTGTCTGA TTAAGAGCGT GGTGTTCGCC ATCACGGTGA CGTGGATTTC GTTGTTTAAC
GGCTACGACG CCATCCCGAC GTCTGCCGGG ATTAGCCGGG CAACCACTCG CACCGTTGTC
CACTCGTCTC TGGCTGTTCT GGGGCTGGAT TTTGTGCTGA CCGCATTGAT GTTTGGGAAT
TGA
 
Protein sequence
MLLNALASLG HKGIKTLRTF GRAGLMLFNA LVGKPEFRKH APLLVRQLYN VGVLSMLIIV 
VSGVFIGMVL GLQGYLVLTT YSAETSLGML VALSLLRELG PVVAALLFAG RAGSALTAEI
GLMRATEQLS SMEMMAVDPL RRVISPRFWA GVISLPLLTV IFVAVGIWGG SLVGVSWKGI
DSGFFWSAMQ NAVDWRMDLV NCLIKSVVFA ITVTWISLFN GYDAIPTSAG ISRATTRTVV
HSSLAVLGLD FVLTALMFGN