Gene EcolC_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0494 
Symbol 
ID6068579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp540121 
End bp540393 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content49% 
IMG OID641599899 
Productphosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 
Protein accessionYP_001723498 
Protein GI170018544 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.715832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.224982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCA AGCAAACTGT TGAAATCACA AACAAGCTGG GCATGCATGC CCGGCCTGCA 
ATGAAGCTGT TTGAATTAAT GCAGGGTTTT GACGCTGAAG TGCTGTTACG TAATGACGAA
GGCACCGAGG CTGAAGCCAA CAGCGTTATT GCGCTGCTGA TGTTGGATTC TGCCAAAGGA
CGGCAGATTG AAGTTGAAGC GACCGGTCCA CAAGAAGAGG AAGCACTGGC CGCCGTTATC
GCCCTCTTTA ACTCTGGTTT TGATGAAGAT TAA
 
Protein sequence
MTVKQTVEIT NKLGMHARPA MKLFELMQGF DAEVLLRNDE GTEAEANSVI ALLMLDSAKG 
RQIEVEATGP QEEEALAAVI ALFNSGFDED