Gene EcolC_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0485 
Symbol 
ID6068522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp526219 
End bp526683 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content48% 
IMG OID641599890 
Producthypothetical protein 
Protein accessionYP_001723489 
Protein GI170018535 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2731] Beta-galactosidase, beta subunit 
TIGRFAM ID[TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.940731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGG GTGAAGTACA GTCATTACCG TCTGCTGGGT TACATCCTGC GTTACAGGAC 
GCGTTAACGC TGGCCTTAGC TGCCAGACCG CAAGAAAAAG CGCCGGGTCG TTACGAATTA
CAGGGCGACA ATATTTTTAT GAATGTCATG ACGTTTAACA CTCAATCGCC CGTCGAGAAA
AAAGCGGAAT TGCACGAGCA ATACATTGAT ATCCAGCTGT TATTAAACGG TGAGGAACGG
ATTCTGTTTG GCATGGCAGG CACTGCGCGC CAATGTGAAG AGTTCCACCA TGAAGATGAT
TACCAGCTTT GCAGCGCCAT TGAAAACGAG CAAACCATCA ACTTAAAACC GGGAATGTTC
GCCGTGTTTA TGCCGGGAGA ACCGCATAAA CCAGGATGCG TTGTCGGCGA GCCGGGTGAG
ATTAAAAAGG TGGTGGTGAA GGTTAAGGCT GATTTAATGG CTTAA
 
Protein sequence
MMMGEVQSLP SAGLHPALQD ALTLALAARP QEKAPGRYEL QGDNIFMNVM TFNTQSPVEK 
KAELHEQYID IQLLLNGEER ILFGMAGTAR QCEEFHHEDD YQLCSAIENE QTINLKPGMF
AVFMPGEPHK PGCVVGEPGE IKKVVVKVKA DLMA