Gene EcolC_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0478 
Symbol 
ID6068466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp518921 
End bp519418 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content55% 
IMG OID641599883 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_001723482 
Protein GI170018528 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000881621 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.250547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTGT CACAGCTAAC ACCACGTCGT CCCTATCTGC TGCGTGCATT CTATGAGTGG 
TTGCTGGATA ACCAGCTCAC GCCGCACCTG GTGGTGGATG TGACGCTCCC TGGCGTGCAG
GTTCCTATGG AATATGCGCG TGACGGGCAA ATCGTACTCA ACATTGCGCC GCGTGCTGTC
GGCAATCTGG AACTGGCGAA TGATGAGGTA CGCTTTAACG CGCGCTTTGG TGGCATTCCG
CGTCAGGTTT CTGTGCCGCT GGCTGCCGTG CTGGCTATCT ACGCCCGTGA AAATGGCGCA
GGCACGATGT TTGAGCCTGA AGCTGCCTAC GATGAAGATA CCAGCATCAT GAATGATGAA
GAGGCATCGG CAGACAACGA AACCGTTATG TCGGTTATTG ATGGCGACAA GCCAGATCAC
GATGATGACA CTCATCCTGA CGATGAACCT CCGCAGCCAC CACGCGGTGG TCGACCGGCA
TTACGCGTTG TGAAGTAA
 
Protein sequence
MDLSQLTPRR PYLLRAFYEW LLDNQLTPHL VVDVTLPGVQ VPMEYARDGQ IVLNIAPRAV 
GNLELANDEV RFNARFGGIP RQVSVPLAAV LAIYARENGA GTMFEPEAAY DEDTSIMNDE
EASADNETVM SVIDGDKPDH DDDTHPDDEP PQPPRGGRPA LRVVK