Gene EcolC_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0465 
Symbol 
ID6068351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp506571 
End bp507503 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content54% 
IMG OID641599870 
Productp-hydroxybenzoic acid efflux subunit AaeA 
Protein accessionYP_001723469 
Protein GI170018515 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.673735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAACAC TAATAAGAAA ATTCTCCCGT ACGGCCATCA CGGTCGTATT AGTCATTCTG 
GCCTTCATCG CAATTTTTAA TGCCTGGGTC TATTACACCG AATCCCCGTG GACGCGTGAC
GCGCGCTTTA GCGCTGATGT CGTTGCGATC GCGCCGGACG TTTCTGGACT CATTACCCAG
GTGAATGTTC ATGATAACCA GCTGGTGAAA AAAGGACAGG TACTGTTCAC CATCGACCAG
CCGCGCTATC AAAAGGCGCT TGAGGAAGCG CAAGCCGATG TTGCTTATTA TCAGGTACTG
GCACAGGAGA AACGCCAGGA GGCCGGACGT CGTAATCGTC TCGGTGTGCA GGCGATGTCT
CGCGAAGAGA TCGACCAGGC CAACAACGTA CTACAAACGG TTCTGCATCA GTTAGCGAAA
GCGCAGGCGA CCCGCGATCT GGCAAAACTG GATCTTGAAC GCACGGTGAT CCGCGCGCCA
GCGGATGGCT GGGTGACCAA CCTCAACGTC TATACCGGTG AGTTTATTAC TCGTGGATCA
ACGGCGGTTG CGCTGGTGAA ACAGAACTCT TTCTATGTAC TGGCCTATAT GGAAGAAACT
AAGCTGGAAG GGGTGCGCCC TGGGTATCGT GCAGAGATCA CGCCGCTTGG CAGTAACAAA
GTGCTGAAAG GGACTGTTGA TAGTGTTGCC GCTGGGGTCA CCAACGCCAG CAGCACGCGT
GACGACAAAG GGATGGCGAC CATCGACTCT AACCTTGAAT GGGTGCGTTT GGCGCAACGT
GTTCCGGTTC GTATTCGTCT CGACAACCAG CAAGAGAACA TCTGGCCTGC GGGCACCACT
GCTACAGTGG TGGTCACTGG CAAACAAGAT CGCGACGAAA GCCAGGATTC GTTCTTCCGT
AAAATGGCCC ATCGCCTGCG TGAGTTTGGT TAA
 
Protein sequence
MKTLIRKFSR TAITVVLVIL AFIAIFNAWV YYTESPWTRD ARFSADVVAI APDVSGLITQ 
VNVHDNQLVK KGQVLFTIDQ PRYQKALEEA QADVAYYQVL AQEKRQEAGR RNRLGVQAMS
REEIDQANNV LQTVLHQLAK AQATRDLAKL DLERTVIRAP ADGWVTNLNV YTGEFITRGS
TAVALVKQNS FYVLAYMEET KLEGVRPGYR AEITPLGSNK VLKGTVDSVA AGVTNASSTR
DDKGMATIDS NLEWVRLAQR VPVRIRLDNQ QENIWPAGTT ATVVVTGKQD RDESQDSFFR
KMAHRLREFG