| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0438 |
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| Symbol | |
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| ID | 6067924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 474875 |
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| End bp | 475900 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641599844 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001723443 |
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| Protein GI | 170018489 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.503691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TGATGATAGC CACACTGGCT GCCGCCAGCG TGCTGCTTGC CGTTGCAAAT
CAGGCGCATG CTGGCGCGAC GCTTGATGCC GTACAGAAAA AAGGTTTTGT GCAATGCGGG
ATCAGTGATG GATTACCTGG GTTCTCTTAT GCCGATGCTG ACGGTAAATT TTCAGGTATT
GATGTTGATA TTTGTCGTGG TGTTGCCGCT GCTGTATTTG GTGACGACAC GAAAGTGAAA
TATACCCCAC TCACAGCAAA AGAACGCTTC ACGGCTTTAC AGTCAGGGGA AGTGGATTTG
CTCTCCCGTA ATACGACCTG GACTTCATCT CGCGACGCCG GGATGGGAAT GGCATTTACT
GGCGTCACTT ATTACGACGG CATTGGCTTC CTGACGCACG ATAAAGCGGG GCTAAAAAGC
GCGAAAGAAC TGGATGGCGC TACCGTCTGT ATTCAGGCGG GTACTGATAC CGAACTCAAC
GTTGCCGACT ATTTCAAGGC AAACAATATG AAGTACACAC CGGTGACTTT CGATCGCTCT
GACGAATCAG CGAAGGCACT GGAATCTGGT CGCTGCGATA CGCTGGCCTC GGATCAGTCG
CAACTGTATG CCCTGCGCAT CAAATTAAGC AACCCAGCTG AATGGATTGT CTTACCGGAG
GTTATCTCTA AAGAACCGCT TGGGCCGGTA GTTCGTCGTG GCGATGATGA ATGGTTCTCG
ATTGTACGCT GGACGCTTTT CGCCATGCTG AATGCTGAAG AGATGGGCAT CAATTCCCAG
AACGTTGATG AAAAAGCGGC TAATCCAGCA ACGCCTGATA TGGCACATCT GCTGGGTAAA
GAAGGCGATT ACGGCAAGGA TCTGAAGTTG GATAATAAAT GGGCCTATAA CATCATCAAA
CAGGTGGGTA ACTACTCGGA AATTTTTGAG CGTAACGTAG GTTCAGAAAG CCCGCTGAAA
ATTAAACGTG GGCAAAATAA TCTCTGGAAT AACGGCGGTA TTCAGTACGC ACCGCCCGTG
CGTTAA
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| Protein sequence | MKKMMIATLA AASVLLAVAN QAHAGATLDA VQKKGFVQCG ISDGLPGFSY ADADGKFSGI
DVDICRGVAA AVFGDDTKVK YTPLTAKERF TALQSGEVDL LSRNTTWTSS RDAGMGMAFT
GVTYYDGIGF LTHDKAGLKS AKELDGATVC IQAGTDTELN VADYFKANNM KYTPVTFDRS
DESAKALESG RCDTLASDQS QLYALRIKLS NPAEWIVLPE VISKEPLGPV VRRGDDEWFS
IVRWTLFAML NAEEMGINSQ NVDEKAANPA TPDMAHLLGK EGDYGKDLKL DNKWAYNIIK
QVGNYSEIFE RNVGSESPLK IKRGQNNLWN NGGIQYAPPV R
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