Gene EcolC_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0435 
Symbol 
ID6067863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp471747 
End bp472505 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content48% 
IMG OID641599841 
ProductABC transporter related 
Protein accessionYP_001723440 
Protein GI170018486 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.337414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAA TTTTACTGCA ACCTGCTAAC GCGATGATTA CGCTGGAAAA CGTCAATAAA 
TGGTATGGAC AATTCCATGT TTTGAAAAAT ATAAATTTAA CCGTGCAACC GGGAGAACGG
ATCGTTCTGT GTGGCCCTTC AGGTTCCGGT AAATCGACAA CCATTCGTTG TATTAATCAT
CTGGAAGAAC ATCAACAGGG ACGGATCGTG GTAGATGGCA TCGAACTTAA TGAAGATATC
CGCAATATTG AGCGCGTCAG GCAGGAAGTG GGAATGGTCT TTCAGCATTT CAATCTCTTC
CCTCATCTGA CCGTTCTACA GAACTGTACC CTGGCACCGA TTTGGGTACG CAAGATGCCT
AAGAAAGAGG CTGAAGATCT GGCGGTGCAT TACCTCGAGC GGGTGAGAAT TGCCGAACAT
GCGCATAAGT TTCCCGGACA GATTTCAGGT GGTCAGCAGC AACGCGTTGC CATTGCGCGT
TCGCTGTGTA TGAAGCCGAA AATTATGTTG TTTGATGAGC CAACGTCGGC GCTCGATCCT
GAGATGGTGA AAGAGGTGCT GGATACGATG ATTGGGCTGG CGCAGTCGGG TATGACAATG
CTGTGTGTAA CACATGAGAT GGGGTTTGCA CGAACCGTCG CTGACCGGGT GATTTTTATG
GATCGTGGGG AGATAGTGGA ACAAGCTGCA CCTGATGAGT TTTTTGCGCA TCCTAAATCA
GAGCGTACGA GGGCATTTTT ATCGCAGGTA ATCCATTAA
 
Protein sequence
MSQILLQPAN AMITLENVNK WYGQFHVLKN INLTVQPGER IVLCGPSGSG KSTTIRCINH 
LEEHQQGRIV VDGIELNEDI RNIERVRQEV GMVFQHFNLF PHLTVLQNCT LAPIWVRKMP
KKEAEDLAVH YLERVRIAEH AHKFPGQISG GQQQRVAIAR SLCMKPKIML FDEPTSALDP
EMVKEVLDTM IGLAQSGMTM LCVTHEMGFA RTVADRVIFM DRGEIVEQAA PDEFFAHPKS
ERTRAFLSQV IH