Gene EcolC_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0430 
Symbol 
ID6067724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp462968 
End bp463510 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content50% 
IMG OID641599829 
ProductDNA topoisomerase type IA Zn finger domain-containing protein 
Protein accessionYP_001723435 
Protein GI170018481 
COG category[L] Replication, recombination and repair 
COG ID[COG0551] Zn-finger domain associated with topoisomerase type I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00156622 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00285537 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGAAAT CAGCACTGTT CACGGTGCGT AATAATGAGT CCTGCCCAAA GTGCGGGGCT 
GAACTGGTTA TTCGATCCGG GAAACACGGT CCGTTTCTTG GATGCTCACA GTATCCGGCG
TGTGACTACG TCCGTCCTCT GAAATCTTCA GCGGATGGAC ATATCGTCAA AGTTCTGGAG
GGGCAGGTTT GCCCTGCATG TGGCGCAAAT CTGGTATTAC GCCAGGGACG CTTTGGTATG
TTTATTGGTT GCATTAACTA CCCTGAATGC GAACATACCG AACTTATCGA TAAACCGGAC
GAAACAGCAA TTACATGCCC CCAATGTCGG ACGGGCCATC TGGTCCAGCG CCGCTCCCGT
TATGGCAAAA CATTTCACTC TTGTGATCGC TACCCGGAGT GTCAATTTGC CATTAACTTC
AAACCCATAG CTGGAGAATG CCCTGAGTGT CATTATCCGC TACTCATCGA AAAGAAAACC
GCGCAGGGTG TAAAACACTT TTGTGCCAGT AAACAATGTG GAAAGCCGGT TTCGGCGGAA
TAA
 
Protein sequence
MAKSALFTVR NNESCPKCGA ELVIRSGKHG PFLGCSQYPA CDYVRPLKSS ADGHIVKVLE 
GQVCPACGAN LVLRQGRFGM FIGCINYPEC EHTELIDKPD ETAITCPQCR TGHLVQRRSR
YGKTFHSCDR YPECQFAINF KPIAGECPEC HYPLLIEKKT AQGVKHFCAS KQCGKPVSAE