| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0423 |
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| Symbol | mscL |
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| ID | 6067654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 456496 |
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| End bp | 456906 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641599822 |
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| Product | large-conductance mechanosensitive channel |
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| Protein accession | YP_001723428 |
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| Protein GI | 170018474 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.465174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000168159 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGCATTA TTAAAGAATT TCGCGAATTT GCGATGCGCG GGAACGTGGT GGATTTGGCG
GTGGGTGTCA TTATCGGTGC GGCATTCGGG AAGATTGTCT CTTCACTGGT TGCCGATATC
ATCATGCCTC CTCTGGGCTT ATTAATTGGC GGGATCGATT TTAAACAGTT TGCTGTCACG
CTACGCGATG CGCAGGGGGA TATCCCTGCT GTTGTGATGC ATTACGGTGT CTTCATTCAA
AACGTCTTTG ATTTTCTGAT TGTGGCCTTT GCCATCTTTA TGGCGATTAA GCTAATCAAC
AAACTGAATC GGAAAAAAGA AGAACCAGCA GCCGCACCTG CACCAACTAA AGAAGAAGTA
TTACTGACAG AAATTCGTGA TTTGCTGAAA GAGCAGAATA ACCGCTCTTA A
|
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| Protein sequence | MSIIKEFREF AMRGNVVDLA VGVIIGAAFG KIVSSLVADI IMPPLGLLIG GIDFKQFAVT
LRDAQGDIPA VVMHYGVFIQ NVFDFLIVAF AIFMAIKLIN KLNRKKEEPA AAPAPTKEEV
LLTEIRDLLK EQNNRS
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