| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0413 |
|---|
| Symbol | secY |
|---|
| ID | 6067423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 450833 |
|---|
| End bp | 452164 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641599812 |
|---|
| Product | preprotein translocase subunit SecY |
|---|
| Protein accession | YP_001723418 |
|---|
| Protein GI | 170018464 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000127015 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000211657 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAC AACCGGGATT AGATTTTCAA AGTGCCAAAG GTGGCTTAGG CGAGCTGAAA
CGCAGACTGC TGTTTGTTAT CGGTGCGCTG ATTGTGTTCC GTATTGGCTC TTTTATTCCG
ATCCCTGGTA TTGATGCCGC TGTACTTGCC AAACTGCTTG AGCAACAGCG AGGCACCATC
ATTGAGATGT TTAACATGTT CTCTGGTGGT GCTCTCAGCC GTGCTTCTAT CTTTGCTCTG
GGGATCATGC CGTATATTTC GGCGTCGATC ATTATCCAGC TGCTGACGGT GGTTCACCCA
ACGTTGGCAG AAATTAAGAA AGAAGGGGAG TCTGGTCGTC GTAAGATCAG CCAGTACACC
CGCTACGGTA CTCTGGTGCT GGCAATATTC CAGTCGATCG GTATTGCTAC CGGTCTGCCG
AATATGCCTG GTATGCAAGG CCTGGTGATT AACCCGGGCT TTGCATTCTA CTTCACCGCT
GTTGTAAGTC TGGTCACAGG AACCATGTTC CTGATGTGGT TGGGCGAACA GATTACTGAA
CGAGGTATCG GCAACGGTAT TTCAATCATT ATCTTCGCCG GTATTGTCGC GGGACTCCCG
CCAGCCATTG CCCATACTAT CGAGCAAGCG CGTCAAGGCG ACCTGCACTT CCTCGTGTTG
CTGTTGGTTG CAGTATTAGT ATTTGCAGTG ACGTTCTTTG TTGTATTTGT TGAGCGTGGT
CAACGCCGCA TTGTGGTAAA CTACGCGAAA CGTCAGCAAG GTCGTCGTGT CTATGCTGCA
CAGAGCACAC ATTTACCGCT GAAAGTGAAT ATGGCGGGGG TAATCCCGGC AATCTTCGCT
TCCAGTATTA TTCTGTTCCC GGCGACCATC GCGTCATGGT TCGGGGGCGG TACTGGTTGG
AACTGGCTGA CAACAATTTC GCTGTATTTG CAGCCTGGGC AACCGCTTTA TGTGTTACTC
TATGCGTCTG CAATCATCTT CTTCTGTTTC TTCTACACGG CGTTGGTTTT CAACCCGCGT
GAAACAGCAG ATAACCTGAA GAAGTCCGGT GCATTTGTAC CAGGAATTCG TCCGGGAGAG
CAAACGGCGA AGTATATCGA TAAAGTAATG ACCCGCCTGA CCCTGGTTGG TGCGCTGTAT
ATTACCTTTA TCTGCCTGAT CCCGGAGTTC ATGCGTGATG CAATGAAAGT ACCGTTCTAC
TTCGGTGGGA CCTCACTGCT TATCGTTGTT GTCGTGATTA TGGACTTTAT GGCTCAAGTG
CAAACTCTGA TGATGTCCAG TCAGTATGAG TCTGCATTGA AGAAGGCGAA CCTGAAAGGC
TACGGCCGAT AA
|
|---|
| Protein sequence | MAKQPGLDFQ SAKGGLGELK RRLLFVIGAL IVFRIGSFIP IPGIDAAVLA KLLEQQRGTI
IEMFNMFSGG ALSRASIFAL GIMPYISASI IIQLLTVVHP TLAEIKKEGE SGRRKISQYT
RYGTLVLAIF QSIGIATGLP NMPGMQGLVI NPGFAFYFTA VVSLVTGTMF LMWLGEQITE
RGIGNGISII IFAGIVAGLP PAIAHTIEQA RQGDLHFLVL LLVAVLVFAV TFFVVFVERG
QRRIVVNYAK RQQGRRVYAA QSTHLPLKVN MAGVIPAIFA SSIILFPATI ASWFGGGTGW
NWLTTISLYL QPGQPLYVLL YASAIIFFCF FYTALVFNPR ETADNLKKSG AFVPGIRPGE
QTAKYIDKVM TRLTLVGALY ITFICLIPEF MRDAMKVPFY FGGTSLLIVV VVIMDFMAQV
QTLMMSSQYE SALKKANLKG YGR
|
|---|
| |