Gene EcolC_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0407 
SymbolrpsH 
ID6067299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp448385 
End bp448777 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content50% 
IMG OID641599806 
Product30S ribosomal protein S8 
Protein accessionYP_001723412 
Protein GI170018458 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000202289 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000218378 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCATGC AAGATCCGAT CGCGGATATG CTGACCCGTA TCCGTAACGG TCAGGCCGCG 
AACAAAGCTG CGGTCACCAT GCCTTCCTCC AAGCTGAAAG TGGCAATCGC CAACGTGCTG
AAGGAAGAAG GTTTTATTGA AGATTTTAAA GTTGAAGGCG ACACCAAGCC TGAACTGGAA
CTTACTCTGA AGTATTTCCA GGGCAAAGCT GTTGTAGAAA GCATTCAGCG TGTCAGCCGC
CCAGGTCTGC GCATCTATAA ACGTAAAGAT GAGCTGCCGA AAGTTATGGC GGGTCTGGGT
ATCGCAGTTG TTTCTACCTC TAAAGGTGTT ATGACTGATC GTGCAGCGCG CCAGGCTGGT
CTTGGTGGCG AAATTATCTG CTACGTAGCC TAA
 
Protein sequence
MSMQDPIADM LTRIRNGQAA NKAAVTMPSS KLKVAIANVL KEEGFIEDFK VEGDTKPELE 
LTLKYFQGKA VVESIQRVSR PGLRIYKRKD ELPKVMAGLG IAVVSTSKGV MTDRAARQAG
LGGEIICYVA