Gene EcolC_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0396 
SymbolrplB 
ID6066928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp443566 
End bp444387 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content53% 
IMG OID641599795 
Product50S ribosomal protein L2 
Protein accessionYP_001723401 
Protein GI170018447 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000072222 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000353424 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGTTG TTAAATGTAA ACCGACATCT CCGGGTCGTC GCCACGTAGT TAAAGTGGTT 
AACCCTGAGC TGCACAAGGG CAAACCTTTT GCTCCGTTGC TGGAAAAAAA CAGCAAATCC
GGTGGTCGTA ACAACAATGG CCGTATCACC ACTCGTCATA TCGGTGGTGG CCACAAGCAG
GCTTACCGTA TTGTTGACTT CAAACGCAAC AAAGACGGTA TCCCGGCAGT TGTTGAACGT
CTTGAGTACG ATCCGAACCG TTCCGCGAAC ATCGCGCTGG TTCTGTACAA AGACGGTGAA
CGCCGTTACA TCCTGGCCCC TAAAGGCCTG AAAGCTGGCG ACCAGATTCA GTCTGGCGTT
GATGCTGCAA TCAAACCAGG TAACACCCTG CCGATGCGCA ACATCCCGGT TGGTTCTACT
GTTCATAACG TAGAAATGAA ACCAGGTAAA GGCGGTCAGC TGGCACGTTC CGCTGGTACT
TACGTTCAGA TCGTTGCTCG TGATGGTGCT TATGTCACCC TGCGTCTGCG TTCTGGTGAA
ATGCGTAAAG TAGAAGCAGA CTGCCGTGCA ACTCTGGGCG AAGTTGGCAA TGCTGAGCAT
ATGCTGCGCG TTCTGGGTAA AGCAGGTGCT GCACGCTGGC GTGGTGTTCG TCCGACCGTT
CGCGGTACCG CGATGAACCC GGTAGACCAC CCACATGGTG GTGGTGAAGG TCGTAACTTT
GGTAAGCACC CGGTAACTCC GTGGGGCGTT CAGACCAAAG GTAAGAAGAC CCGCAGCAAC
AAGCGTACTG ATAAATTCAT CGTACGTCGC CGTAGCAAAT AA
 
Protein sequence
MAVVKCKPTS PGRRHVVKVV NPELHKGKPF APLLEKNSKS GGRNNNGRIT TRHIGGGHKQ 
AYRIVDFKRN KDGIPAVVER LEYDPNRSAN IALVLYKDGE RRYILAPKGL KAGDQIQSGV
DAAIKPGNTL PMRNIPVGST VHNVEMKPGK GGQLARSAGT YVQIVARDGA YVTLRLRSGE
MRKVEADCRA TLGEVGNAEH MLRVLGKAGA ARWRGVRPTV RGTAMNPVDH PHGGGEGRNF
GKHPVTPWGV QTKGKKTRSN KRTDKFIVRR RSK