Gene EcolC_0384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0384 
Symbol 
ID6066742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp432953 
End bp433462 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content56% 
IMG OID641599783 
Productgeneral secretion pathway protein H 
Protein accessionYP_001723389 
Protein GI170018435 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.105042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGC AACGCGGGTT TACCCTGCTG GAGATGATGC TGGTGCTGGC GCTGGTCGCT 
ATCACGGCAA GCGTGGTGCT CTTCACATAT GGCCGGGAGG ATGTCGCCAA CACTCGTGCG
CGCGAAACAG CGGCGCGGTT TACCGCTGCA CTTGAATTAG CCATCGACCG CGCCACGCTC
AGTGGTCAGC CTGTCGGTAT CCATTTCTCT GATTCAGCAT GGCGCATTAT GGTACCGGGC
AAAACACCAT CAGCCTGGCG CTGGGTTCCA TTACAAGAAG ATGCCGCAGA CGAGAGCCAA
AATGACTGGG ATGAAGAACT CTCAATTCAT CTTCAGCCAT TTAAACCTGA TGACAGCAAC
CAGCCACAGG TTGTGATTCT GGCCGACGGA CAAATCACGC CCTTCTCTTT GTTGATGGCT
AACGCCGGGA CCGGTGAGCC GCTCCTGACG TTAGTCTGTT CAGGCTCATG GCCCCTGGAT
CAAACGCTCG CCAGAGATAC CCGCCCATGA
 
Protein sequence
MNQQRGFTLL EMMLVLALVA ITASVVLFTY GREDVANTRA RETAARFTAA LELAIDRATL 
SGQPVGIHFS DSAWRIMVPG KTPSAWRWVP LQEDAADESQ NDWDEELSIH LQPFKPDDSN
QPQVVILADG QITPFSLLMA NAGTGEPLLT LVCSGSWPLD QTLARDTRP