Gene EcolC_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0379 
Symbol 
ID6066626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp429387 
End bp429848 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content48% 
IMG OID641599778 
Productgeneral secretion pathway M protein 
Protein accessionYP_001723384 
Protein GI170018430 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.717052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAT CATGGTGGGC AGAAAAATCC ACATCGGAAA AACAGATCGT TGCGGCACTG 
GCGGTTCTCT CGCTCGGCGT TTTTTGTTGG CTTGGGGTGA TAAAACCGAT AGATACCTAC
ATTGCAGAGC ATCAGTCCCA CGCGCAAAAA ATTAAGAAGG ACATCAAATG GATGCAGGAT
CAAGCGAGCA CCCATGGTTT ACTCGGTCAT CCTGCGCTTA CGCAGCCCAT CAAAAATATC
CTTCTCGAGG AAGCAAAACG TGAGAATTTG GCTATCACGC TGGAAAACGG CCCGGACAAT
ACTCTGACAA TTCATCCTGT CACAGCTCCC CTCGAAAACG TCTCCCGCTG GCTCACTACG
GCACAGGTAA CATACGGTAT TGTTATTGAA GACCTTCAGT TTACTCTTGC CGGAAACGAA
GAGATCACCC TCAGGCATTT GTCCTTCAGG GAGCAACAAT AA
 
Protein sequence
MIKSWWAEKS TSEKQIVAAL AVLSLGVFCW LGVIKPIDTY IAEHQSHAQK IKKDIKWMQD 
QASTHGLLGH PALTQPIKNI LLEEAKRENL AITLENGPDN TLTIHPVTAP LENVSRWLTT
AQVTYGIVIE DLQFTLAGNE EITLRHLSFR EQQ