Gene EcolC_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0348 
Symbol 
ID6065975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp401181 
End bp402362 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content51% 
IMG OID641599747 
Producthypothetical protein 
Protein accessionYP_001723353 
Protein GI170018399 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACA GCAATCGCAT CAAGCTCACA TGGATTAGCT TTCTCTCCTA CGCACTGACT 
GGTGCGTTGG TTATTGTCAC CGGGATGGTG ATGGGAAATA TCGCCGATTA TTTCAATCTG
CCTGTTTCCA GTATGAGTAA CACCTTCACC TTCCTCAACG CCGGCATTTT AATCTCTATC
TTCCTCAACG CCTGGCTGAT GGAAATCGTC CCGTTGAAAA CGCAGTTACG TTTTGGCTTT
CTCCTGATGG TGCTGGCGGT TGCCGGTTTG ATGTTCAGCC ACAGCCTGGC GCTGTTCTCG
ACGGCGATGT TCATTCTCGG GGTGGTCAGC GGCATTACTA TGTCGATTGG TACATTCCTG
ATAACACAAA TGTATGAAGG GCGTCAGCGC GGTTCCCGCC TGTTATTTAC TGACTCCTTC
TTCAGTATGG CTGGGATGAT TTTCCCAATG ATCGCCGCGT TTCTACTGGC GCGCAGCATT
GAGTGGTACT GGGTTTATGC CTGCATCGGG CTGGTGTATG TCGCTATTTT TATTCTGACC
TTCGGCTGTG AGTTCCCGGC ACTGGGCAAA CATGCGCCAA AAACGGATGC TCCGGTAGAG
AAAGAAAAGT GGGGGATCGG CGTACTGTTT CTCTCTGTTG CGGCGCTGTG CTACATCCTC
GGTCAGTTAG GTTTTATCTC CTGGGTGCCT GAGTATGCCA AAGGCCTGGG CATGAGCCTG
AACGACGCGG GCACGCTGGT GAGTAACTTC TGGATGTCAT ACATGGTCGG CATGTGGGCG
TTCAGCTTTA TTCTTCGCTT CTTTGATTTG CAACGCATTC TGACCGTACT GGCTGGTCTG
GCTGCGATTC TGATGTACGT CTTTAACACC GGAACACCAG CACATATGGC GTGGTCAATT
CTCGCTCTGG GCTTCTTCTC CAGCGCGATC TATACCACCA TCATCACCCT GGGTTCACAG
CAGACCAAAG TACCGTCGCC AAAACTGGTT AACTTTGTCC TGACCTGCGG AACCATCGGT
ACTATGTTGA CCTTTGTGGT TACCGGCCCG ATTGTTGAAC ATAGCGGTCC GCAGGCGGCA
CTGCTTACAG CAAACGGTCT GTACGCTGTC GTCTTTGTGA TGTGCTTCCT GTTAGGTTTC
GTCAGCCGTC ACCGTCAGCA TAACACTCTG ACCTCTCATT AA
 
Protein sequence
MTNSNRIKLT WISFLSYALT GALVIVTGMV MGNIADYFNL PVSSMSNTFT FLNAGILISI 
FLNAWLMEIV PLKTQLRFGF LLMVLAVAGL MFSHSLALFS TAMFILGVVS GITMSIGTFL
ITQMYEGRQR GSRLLFTDSF FSMAGMIFPM IAAFLLARSI EWYWVYACIG LVYVAIFILT
FGCEFPALGK HAPKTDAPVE KEKWGIGVLF LSVAALCYIL GQLGFISWVP EYAKGLGMSL
NDAGTLVSNF WMSYMVGMWA FSFILRFFDL QRILTVLAGL AAILMYVFNT GTPAHMAWSI
LALGFFSSAI YTTIITLGSQ QTKVPSPKLV NFVLTCGTIG TMLTFVVTGP IVEHSGPQAA
LLTANGLYAV VFVMCFLLGF VSRHRQHNTL TSH