Gene EcolC_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0344 
SymbolcysG 
ID6065889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp395728 
End bp397101 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content54% 
IMG OID641599743 
Productsiroheme synthase 
Protein accessionYP_001723349 
Protein GI170018395 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 
TIGRFAM ID[TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.898093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCATT TGCCTATATT TTGCCAATTA CGCGATCGCG ACTGTCTGAT TGTCGGCGGT 
GGTGATGTCG CGGAACGCAA AGCAAGGTTG CTGTTAGACG CAGGCGCTCG CTTAACGGTG
AATGCATTAG CGTTTATTCC ACAGTTCACC GCATGGGCAG ATGCAGGCAT GTTAACCCTC
GTCGAAGGGC CATTTGATGA AAGCCTTCTC GACACCTGCT GGCTGGCGAT TGCAGCGACG
GATGATGACG CGCTTAACCA GCGCGTCAGC GAAGCCGCTG AAGCTCGTCG CATCTTCTGT
AACGTAGTCG ATGCGCCGAA AGCCGCCAGC TTTATTATGC CGTCGATTAT TGACCGCTCA
CCGCTCATGG TCGCGGTCTC CTCTGGCGGC ACCTCTCCGG TTCTGGCACG CCTGTTGCGC
GAAAAACTCG AATCACTGCT GCCGTTGCAT CTGGGCCAGG TAGCGAAATA CGCCGGGCAA
TTACGCGGGC GAGTGAAACA ACAGTTCGCC ACGATGGGTG AGCGTCGCCG TTTCTGGGAG
AAATTGTTCG TTAACGATCG CCTGGCGCAG TCGCTGGCAA ACAACGATCA GAAAGCCATT
ACTGAAACCA CCGAACAGTT AATCAACGAA CCGCTTGACC ATCGCGGTGA AGTGGTGCTG
GTTGGTGCAG GTCCGGGCGA TGCCGGGCTG CTGACGCTGA AAGGACTGCA ACAAATTCAG
CAGGCAGATG TGGTGGTCTA CGACCGTCTG GTTTCTGACG ATATTATGAA TCTGGTACGC
CGCGATGCTG ATCGCGTTTT CGTCGGCAAA CGCGCGGGAT ACCACTGTGT ACCGCAGGAA
GAGATTAACC AGATCCTGCT GCGGGAAGCG CAAAAAGGCA AACGCGTGGT GCGGCTGAAA
GGTGGCGATC CGTTTATTTT TGGCCGTGGT GGCGAAGAGC TGGAAACACT GTGCAACGCG
GGTATTCCGT TCTCGGTGGT TCCGGGTATT ACCGCAGCTT CTGGTTGCTC TGCCTATTCG
GGTATTCCAC TCACGCATCG CGATTATGCC CAGAGCGTAC GCTTAATTAC CGGACACTTA
AAAACCGGTG GCGAGCTGGA CTGGGAAAAC CTGGCGGCAG AAAAACAGAC GCTGGTGTTC
TATATGGGGT TGAATCAGGC CGCGACTATT CAGCAAAAGC TGATTGAACA CGGTATGCCT
GGCGAAATGC CGGTGGCAAT TGTCGAAAAC GGAACGGCAG TCACGCAGCG CGTGATTGAC
GGTACGCTCA CGCAACTCGG TGAACTTGCT CAGCAAATGA ACAGTCCATC GCTAATTATT
ATTGGTCGGG TTGTTGGCCT GCGCGATAAA CTGAACTGGT TCTCCAACCA TTAA
 
Protein sequence
MDHLPIFCQL RDRDCLIVGG GDVAERKARL LLDAGARLTV NALAFIPQFT AWADAGMLTL 
VEGPFDESLL DTCWLAIAAT DDDALNQRVS EAAEARRIFC NVVDAPKAAS FIMPSIIDRS
PLMVAVSSGG TSPVLARLLR EKLESLLPLH LGQVAKYAGQ LRGRVKQQFA TMGERRRFWE
KLFVNDRLAQ SLANNDQKAI TETTEQLINE PLDHRGEVVL VGAGPGDAGL LTLKGLQQIQ
QADVVVYDRL VSDDIMNLVR RDADRVFVGK RAGYHCVPQE EINQILLREA QKGKRVVRLK
GGDPFIFGRG GEELETLCNA GIPFSVVPGI TAASGCSAYS GIPLTHRDYA QSVRLITGHL
KTGGELDWEN LAAEKQTLVF YMGLNQAATI QQKLIEHGMP GEMPVAIVEN GTAVTQRVID
GTLTQLGELA QQMNSPSLII IGRVVGLRDK LNWFSNH