Gene EcolC_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0340 
Symbol 
ID6065779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp391759 
End bp392589 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content55% 
IMG OID641599739 
Productfructoselysine 3-epimerase 
Protein accessionYP_001723345 
Protein GI170018391 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.452792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAG GTATGTTTAC CTGCGGCCAC CAGCGGCTGC CTATTGAACA CGCATTTCGT 
GATGCAAGCG AGCTGGGTTA CGACGGCATC GAAATTTGGG GCGGTCGCCC GCACGCGTTC
GCGCCGGACT TAAAAGCGGG CGGCATCAAA CAAATCAAGG CGCTGGCGCA GACGTATCAG
ATGCCGATTA TCGGCTATAC GCCAGAAACC AACGGCTATC CGTATAACAT GATGCTGGGC
GATGAACATA TGCGTCGCGA AAGCCTCGAC ATGATCAAGC TGGCGATGGA TATGGCAAAA
GAGATGAACG CGGGTTATAC GCTGATTTCC GCGGCCCACG CGGGCTATCT CACGCCACCT
AATGTTATCT GGGGACGGCT GGCAGAGAAC CTAAGCGAAC TGTGTGAGTA CGCGGAAAAC
ATCGGCATGG ATCTAATCCT CGAACCGTTA ACGCCGTATG AATCGAACGT CGTGTGTAAT
GCTAATGATG TGCTTCATGC GCTGGCGCTG GTGCCTTCGC CGCGCCTGTT CAGCATGGTC
GACATTTGCG CGCCGTATGT CCAGGCGGAA CCGGTGATGA GTTATTTCGA CAAACTGGGC
GATAAATTAC GTCATCTGCA TATTGTCGAC AGCGACGGGG CCAGCGACAC GCATTACATT
CCTGGAGAAG GCAAAATGCC GCTGCGGGAA CTGATGCGCG ATATTATTGA GTGGGGCTAT
GAGGGTTACT GTACGGTGGA GCTGGTGACG ATGTATATGA ACGAGCCCAG ACTCTATGCC
CGCCAGGCGC TGGAACGCTT TCGCGCGCTG CTGCCGGAGG ATGAGAGATG A
 
Protein sequence
MKTGMFTCGH QRLPIEHAFR DASELGYDGI EIWGGRPHAF APDLKAGGIK QIKALAQTYQ 
MPIIGYTPET NGYPYNMMLG DEHMRRESLD MIKLAMDMAK EMNAGYTLIS AAHAGYLTPP
NVIWGRLAEN LSELCEYAEN IGMDLILEPL TPYESNVVCN ANDVLHALAL VPSPRLFSMV
DICAPYVQAE PVMSYFDKLG DKLRHLHIVD SDGASDTHYI PGEGKMPLRE LMRDIIEWGY
EGYCTVELVT MYMNEPRLYA RQALERFRAL LPEDER