Gene EcolC_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0325 
Symbol 
ID6065381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp377623 
End bp378909 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content54% 
IMG OID641599724 
Producthypothetical protein 
Protein accessionYP_001723330 
Protein GI170018376 
COG category[S] Function unknown 
COG ID[COG3266] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00730739 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.132997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAT TCAAACCAGA AGACGAGCTG AAACCCGATC CCAGCGATCG TCGTACTGGT 
CGTTCTCGTC AATCTTCTGA ACGTTCTGAG CGTACTGAAC GTGGCGAACC GCAGATCAAT
TTTGATGATA TTGAACTTGA TGACACTGAC GATCGCCGTC CGACTCGTGC GCAAAAAGAG
CGCAATGAGG AACCGGAAAT CGAAGAAGAA ATTGACGAAT CCGAAGATGA AACCGTGGAT
GAAGAGCGCG TAGAGCGTCG TCCGCGTAAG CGCAAAAAAG CAGCCAGTAA ACCCGCTTCT
CGTCAGTATA TGATGATGGG CGTCGGCATT CTGGTTCTAC TGCTGTTGAT CATCGGTATC
GGTTCTGCGC TAAAAGCCCC CTCGACCTCT TCCAGCGATC AAACCGCGTC TGGCGAGAAG
AGTATTGATC TTGCAGGCAA TGCGACCGAT CAGGCGAATG GGGTGCAGCC AGCGCCGGGA
ACCACGTCTG CGGAAAATAC TCAGCAGGAT GTTTCTCTGC CACCGATCTC TTCTACGCCG
ACTCAAGGGC AAACCCCGGC GGCAACGGAT GGTCAACAAC GTGTTGAAGT GCAGGGTGAC
CTGAACAATG CGCTGACCCA GCCACAAAAT CAGCAACAGT TGAACAATGT GGCGGTCAAT
TCCACATTGC CGACCGAACC CGCGACTGTC GCGCCTGTTC GCAATGGCAA TGCATCGCGT
GAAACGGCGA AAACGCAAAC CGCTGAACGT CCGGCCACTA CGCGTCCAGC TCGCCAGCAG
GCAGTGATTG AACCGAAAAA ATCGCAAGCA ACCGTGAAAA CGGAGCCGAA GCCGGTAGCA
CAGACGCCGA AGCGTACTGA ACCAGCTGCC CCTGTGGCGA GCACGAAGGC ACCGGCTGCG
ACTTCTACGC CAGCACCAAA AGAGACGGCG ACTACGGCTC CAGTACAGAC GGCATCCCCG
GCGCAAACCA CGGCAACACC AGCCGCTGGA GGGAAGACCG CAGGTAATGT TGGTTCGTTG
AAATCGGCAC CGTCCAGCCA TTACACTCTG CAGCTGAGCA GTTCCTCTAA CTACGACAAC
CTGAACGGTT GGGCGAAGAA AGAGAATCTG AAAAACTACG TTGTCTATGA AACGACGCGT
AATGGTCAGC CGTGGTATGT CCTGGTTTCT GGCGTGTACG CTTCGAAAGA AGAGGCGAAA
AAAGCGGTAT CTACATTGCC AGCAGATGTT CAGGCCAAAA ACCCGTGGGC GAAACCGCTG
CGTCAGGTAC AGGCCGATCT GAAGTAA
 
Protein sequence
MDEFKPEDEL KPDPSDRRTG RSRQSSERSE RTERGEPQIN FDDIELDDTD DRRPTRAQKE 
RNEEPEIEEE IDESEDETVD EERVERRPRK RKKAASKPAS RQYMMMGVGI LVLLLLIIGI
GSALKAPSTS SSDQTASGEK SIDLAGNATD QANGVQPAPG TTSAENTQQD VSLPPISSTP
TQGQTPAATD GQQRVEVQGD LNNALTQPQN QQQLNNVAVN STLPTEPATV APVRNGNASR
ETAKTQTAER PATTRPARQQ AVIEPKKSQA TVKTEPKPVA QTPKRTEPAA PVASTKAPAA
TSTPAPKETA TTAPVQTASP AQTTATPAAG GKTAGNVGSL KSAPSSHYTL QLSSSSNYDN
LNGWAKKENL KNYVVYETTR NGQPWYVLVS GVYASKEEAK KAVSTLPADV QAKNPWAKPL
RQVQADLK