Gene EcolC_0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0317 
SymbolmrcA 
ID6065992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp369506 
End bp372058 
Gene Length2553 bp 
Protein Length850 aa 
Translation table11 
GC content55% 
IMG OID641599716 
Productpeptidoglycan synthetase 
Protein accessionYP_001723322 
Protein GI170018368 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.47804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.149248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTTCG TAAAGTATTT TTTGATCCTT GCAGTCTGTT GCATTCTGCT GGGAGCAGGC 
TCGATTTATG GCCTATACCG CTACATCGAG CCACAACTGC CGGATGTGGC GACATTAAAA
GATGTTCGCC TGCAAATTCC GATGCAGATT TACAGCGCCG ATGGCGAGCT GATTGCTCAA
TACGGTGAGA AACGTCGTAT TCCGGTTACG TTGGATCAAA TCCCACCGGA GATGGTGAAA
GCCTTTATCG CGACAGAAGA CAGCCGCTTC TACGAGCATC ACGGCGTTGA CCCGGTGGGG
ATCTTCCGTG CAGCAAGCGT GGCGCTGTTC TCCGGTCACG CGTCACAAGG GGCAAGTACC
ATTACCCAGC AGCTGGCGAG AAACTTCTTC CTCAGTCCAG AACGCACGCT GATGCGTAAG
ATTAAGGAAG TCTTCCTCGC GATTCGCATT GAACAGCTGC TGACGAAAGA CGAGATCCTC
GAGCTTTATC TGAACAAGAT TTACCTTGGT TACCGCGCCT ATGGTGTCGG TGCTGCGGCA
CAAGTCTATT TCGGAAAAAC GGTCGACCAA CTGACGCTGA ACGAAATGGC GGTGATAGCC
GGGCTGCCGA AAGCGCCTTC CACCTTCAAC CCGCTCTACT CGATGGATCG TGCCGTCGCG
CGGCGTAACG TCGTGCTGTC GCGGATGCTG GATGAAGGGT ATATCACCCA ACAACAGTTC
GATCAGACAC GCACTGAGGC GATTAACGCT AACTATCACG CGCCGGAGAT TGCTTTCTCT
GCGCCGTACC TGAGCGAAAT GGTGCGCCAG GAGATGTATA ACCGTTATGG CGAAAGTGCC
TATGAAGACG GTTATCGCAT TTACACCACC ATCACCCGCA AAGTGCAGCA GGCCGCGCAG
CAGGCGGTAC GTAATAACGT GCTGGACTAC GACATGCGCC ACGGCTATCG CGGCCCGGCA
AATGTGCTGT GGAAAGTGGG CGAGTCGGCG TGGGATAACA ACAAGATTAC CGATACGCTG
AAGGCGCTGC CGACCTATGG TCCGCTGCTG CCTGCCGCAG TCACCAGCGC CAATCCTCAG
GAAGCGACGG CAATGCTGGC GGACGGGTCG ACTGTCGCAT TGAGTATGGA CGGCGTTCGC
TGGGCGCGTC CTTACCGTTC GGATACTCAG CAGGGACCGA CGCCGCGTAA AGTGACCGAT
GTTCTGCAAA CGGGACAGCA AATCTGGGTT CGTCAGGTCG GCGATGCATG GTGGCTGGCA
CAAGTGCCGG AAGTGAACTC GGCGCTGGTG TCGATCAATC CGCAAAATGG TGCCGTTATG
GCGCTGGTCG GTGGCTTTGA TTTCAATCAG AGCAAGTTTA ACCGCGCCAC CCAGGCACTG
CGTCAGGTGG GTTCCAACAT CAAACCGTTC CTCTACACCG CGGCGATGGA TAAAGGTCTG
ACGCTGGCAA GTATGTTGAA CGATGTGCCA ATTTCCCGCT GGGATGCAGG TGCCGGTTCT
GACTGGCAGC CGAAGAACTC ACCACCGCAG TATGCCGGTC CAATTCGCTT ACGTCAGGGG
CTGGGTCAGT CGAAAAACGT GGTGATGGTA CGCGCAATGC GGGCGATGGG CGTCGACTAC
GCTGCAGAAT ATCTGCAACG CTTCGGCTTC CCGGCGCAAA ACATTGTCCA CACCGAATCG
CTGGCGCTGG GTTCAGCGTC CTTTACCCCA ATGCAGGTGG CGCGTGGCTA CGCGGTCATG
GCGAACGGCG GCTTCCTGGT GGACCCGTGG TTTATCAGCA AAATTGAAAA CGATCAGGGC
GGCGTGATTT TCGAAGCGAA ACCGAAAGTA GCTTGCCCGG AATGTGATAT TCCGGTGATT
TACGGTGATA CGCAGAAATC GAACGTGCTG GAAAATAACG ATGTTGAAGA TGTCGCTATC
TCCCGCGAGC AGCAGAATGT TTCTGTACCA ATGCCGCAGC TGGAGCAGGC TAATCAGGCG
TTAGTGGCGA AGACTGGCGC GCAGGAGTAC GCACCGCACG TCATCAACAC TCCGCTGGCA
TTCCTGATTA AGAGTGCTTT GAACACCAAT ATCTTTGGTG AGCCAGGCTG GCAGGGTACC
GGCTGGCGTG CAGGTCGTGA TTTGCAGCGT CGCGATATCG GCGGGAAAAC CGGTACCACT
AACAGTTCGA AAGATGCGTG GTTCTCGGGT TACGGTCCGG GTGTTGTGAC CTCGGTCTGG
ATTGGCTTTG ATGATCACCG TCGTAATCTC GGTCATACAA CGGCTTCCGG AGCGATTAAA
GATCAGATCT CAGGTTACGA AGGCGGTGCC AAGAGTGCCC AGCCTGCATG GGACGCTTAT
ATGAAAGCCG TTCTTGAAGG TGTGCCGGAG CAGCCGCTAA CGCCGCCACC GGGTATTGTG
ACGGTGAATA TCGATCGCAG CACCGGGCAG TTAGCTAATG GTGGCAACAG CCGCGAAGAG
TATTTCATCG AAGGTACGCA GCCGACACAA CAAGCGGTGC ACGAGGTGGG TACGACCATT
ATCGATAATG GCGAAGCACA GGAATTGTTC TGA
 
Protein sequence
MKFVKYFLIL AVCCILLGAG SIYGLYRYIE PQLPDVATLK DVRLQIPMQI YSADGELIAQ 
YGEKRRIPVT LDQIPPEMVK AFIATEDSRF YEHHGVDPVG IFRAASVALF SGHASQGAST
ITQQLARNFF LSPERTLMRK IKEVFLAIRI EQLLTKDEIL ELYLNKIYLG YRAYGVGAAA
QVYFGKTVDQ LTLNEMAVIA GLPKAPSTFN PLYSMDRAVA RRNVVLSRML DEGYITQQQF
DQTRTEAINA NYHAPEIAFS APYLSEMVRQ EMYNRYGESA YEDGYRIYTT ITRKVQQAAQ
QAVRNNVLDY DMRHGYRGPA NVLWKVGESA WDNNKITDTL KALPTYGPLL PAAVTSANPQ
EATAMLADGS TVALSMDGVR WARPYRSDTQ QGPTPRKVTD VLQTGQQIWV RQVGDAWWLA
QVPEVNSALV SINPQNGAVM ALVGGFDFNQ SKFNRATQAL RQVGSNIKPF LYTAAMDKGL
TLASMLNDVP ISRWDAGAGS DWQPKNSPPQ YAGPIRLRQG LGQSKNVVMV RAMRAMGVDY
AAEYLQRFGF PAQNIVHTES LALGSASFTP MQVARGYAVM ANGGFLVDPW FISKIENDQG
GVIFEAKPKV ACPECDIPVI YGDTQKSNVL ENNDVEDVAI SREQQNVSVP MPQLEQANQA
LVAKTGAQEY APHVINTPLA FLIKSALNTN IFGEPGWQGT GWRAGRDLQR RDIGGKTGTT
NSSKDAWFSG YGPGVVTSVW IGFDDHRRNL GHTTASGAIK DQISGYEGGA KSAQPAWDAY
MKAVLEGVPE QPLTPPPGIV TVNIDRSTGQ LANGGNSREE YFIEGTQPTQ QAVHEVGTTI
IDNGEAQELF